YALI0B19052g

Overview

Description weakly similar to uniprot|P32525 Saccharomyces cerevisiae YJL201w ECM25 involved in cell wall biogenesis and architecture
Locus type CDS
Locus tag YALI0B19052g

Location

Species Yarrowia lipolytica Positions 2519243..2521211
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1969 (nuc.)
Previous locus YALI0B19030g Next locus YALI0B19074g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19052g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19052gYALI0B19052g_mRNA-001YALI0B19052g_CDS-001

Nucleotide sequence

 

>YALI0B19052g
ATGGAGATTAAAGAGAAAGTCTTCAAGAAGGCCATCCCCACGCCGACAAAGTCCAAGGAC
GTGTCGAGTGACATGGCCAACGACGTGCCACAAGATCCCAAGCGCGTGGCTGCCAAAATC
GTCTACCAAACCGATACTGTGGACCCTCAGACCCGACTTCCCATCGTTGTTATCGACTCC
AGCGCTCTTCCGGAACCCTCGAGCAAGTCGCACGCCATTCTGTTCCCGCATCTCGTCAGC
AACCTGCCCAGTACGCCGTTTGTGCTCGTTTTCTTTGCATGTGGCGCTCCCCAGCGGCCC
TCGTGGTCCTGGGCCACAAAAACATACGCCATGATCGAACGAGACGTCAAAAAGAGAGTC
CGAAAGGTCTACGTAGTGCACGAGTCGTGGTGGGTTCGAGCGGTTACGGAGATGCTAGGC
GGCTTCATCTCGACGAAATTCAAGGCCAAAATCCACCACGTTTCGTCGCTGTCGCAACTC
GCCCGAGAAATCGACGTCACAGCCATCAACATCCCGCCACGTGTTCTGCTGCACAATCGC
AAGGTGGAGGATGAAATCACCGTACCGCGACACGTTGAACCTGTGTTTGGCCGCCTGTTT
GACCCCAGAAACCCTCCCAGAATCTGGAACGTCATGCTCGAGTATCTTACACAGATGGCT
CCGTATGTGGAGGGCGTGTTTCGAGTGTCCCCAAGATCAGATCTGCTGGAGATTGTCAGA
TGCAACTGCGATCGAGGCCAAATGTTTGAACTCGCAGACTATGGACCTCACGTGGCTGCT
TCCTTGCTAAAACGGTTCCTTAGAGACTGCCCCGAACCAGCTCTTCCAGCAGACAGAATC
CCACTGCCCATCAAGGATGACGCAGAGTACACAGAGGATACGATCCGACAGCTGCCCGTC
ACCTCGCTGTTCATCTTCCTCTACGTGGTGCCTCTTCTCCAAAGCATTGTGAGAAACACA
CAGGTGACGCGGCACTCGGAACACTCGATATCCGTGTGCTTTGCACCTGCACTGCTGGGA
ATCACAGCGTCGCGTGACTCGACGGCAGTGGGTATCCGTCTGCTCAAAAATGTCATTGAG
CACTGGGCTGTTCTGGCCCCCAAGCTTGAGAACGAGCTGTACACCCGAATTAACGTCACT
GACGTGAATAGAATTCAGCAGCTGGCTCCCAACGCCGGAGGCCTGGGTGCTGCTCCAGCA
TACCCTCCATACGACGGCGCGTACGACATGTCGAAGAGACAAGTATCCGCTCCTCTCACC
TTCCTCAACAACAGCAAATCTTCTCCTTCGCTGAGACAGAGAAACGTGTCCGACGCTGCG
CCGGTACCTCCTTTCCCCATTTCTGTGTCTGTTGAGTCGCTCGTAGATATCGCAGACGAC
GACGCGCAGATTTCACCTGTCAAGTCACGTGGACGGCAGATGAACAACAATGGGCTGCTC
TCGTCAGTGGAGCTCATGCCCCCGCCTCCCGTGCCCAAAAAACCCGTTCAATTGCAGTCT
AGATCGAGACATAACTCCGTGTCTGAGCTGGCAGCTGAACTGGAGCCTCCCAGCACACCC
AAAACTCCCACCAAGTTTGTGCTGCAGCCCTCCACCAAGATTAACGCAGATATCGACCCA
TCCACGTTCAAGATTCCTCCTTCTCCCCCTCCACCTCGAAAGTTTGGACCACGATCGAGG
TCCGTGGCATCGACCAAGAGAGGCAAGATGGTCGAGGAGCTCTCTAAGATGTTTGAGGAG
CGATGCGAGACCGCCAATATGATGCTGGAGTTTGAGCGGCATCGACAGATTCGCCAGGAG
GCCGCAGACAGACTCAACAGAGGTAGTCCGGAGCCGTGAACGCATACAGACTAACGGCAC
CTAGAATTGACAAGTGGGTCAATGCCTCTATGATATACCCAGACTCTACATGCAGACCAC
CCATGTCTGCGAACCTTGAAGATGTAATGAATTGATGATTTGAATAAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19052g_CDS-001

Protein length: 613 aa.
Product: Conserved hypothetical protein

>YALI0B19052g_CDS-001 MEIKEKVFKKAIPTPTKSKDVSSDMANDVPQDPKRVAAKIVYQTDTVDPQTRLPIVVIDS
SALPEPSSKSHAILFPHLVSNLPSTPFVLVFFACGAPQRPSWSWATKTYAMIERDVKKRV
RKVYVVHESWWVRAVTEMLGGFISTKFKAKIHHVSSLSQLAREIDVTAINIPPRVLLHNR
KVEDEITVPRHVEPVFGRLFDPRNPPRIWNVMLEYLTQMAPYVEGVFRVSPRSDLLEIVR
CNCDRGQMFELADYGPHVAASLLKRFLRDCPEPALPADRIPLPIKDDAEYTEDTIRQLPV
TSLFIFLYVVPLLQSIVRNTQVTRHSEHSISVCFAPALLGITASRDSTAVGIRLLKNVIE
HWAVLAPKLENELYTRINVTDVNRIQQLAPNAGGLGAAPAYPPYDGAYDMSKRQVSAPLT
FLNNSKSSPSLRQRNVSDAAPVPPFPISVSVESLVDIADDDAQISPVKSRGRQMNNNGLL
SSVELMPPPPVPKKPVQLQSRSRHNSVSELAAELEPPSTPKTPTKFVLQPSTKINADIDP
STFKIPPSPPPPRKFGPRSRSVASTKRGKMVEELSKMFEERCETANMMLEFERHRQIRQE
AADRLNRGSPEP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG