YALI0B18964g

Overview

Description weakly similar to uniprot|A1CD71 Aspergillus clavatus conserved hypothetical protein
Locus type CDS
Locus tag YALI0B18964g

Location

Species Yarrowia lipolytica Positions 2494350..2497288
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 2939 (nuc.)
Previous locus YALI0B18942g Next locus YALI0B18975r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18964g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18964gYALI0B18964g_mRNA-001YALI0B18964g_CDS-001

Nucleotide sequence

 

>YALI0B18964g
ATGCTGAAAATCTTCAAGCGACACGTCTCTAAGGAGCATAAAGGGGACGGCGGCCCGTCG
GTGGCGTCTCCAACGGTCACCTCTCCGTCCATCTCTTCGCCCTCTGTGTCGTCCGAGAGC
CTGACCTTCAACAGCCTCAAAAGCGAAACGCACGTGACGGGGTCCGACTCCGCAGCGCAT
TTGCCGCTCAATCTGCCCGCTTGCGAATGGGTTCTCCCCCACTTTGGATCGTCTGCTAGT
GCGTCGGACAATTCGTCCTTCAGCTGGTCGCCCCAAAGCTCGCCTGTACAGCAGTCCCCC
TCTGCAGTGCAGGACAATGGCTTTGCAGGAGGTACAGCGCAACCTAAAAATAGGTCGTGG
TCCCCAAACCTTATTTCGCAAGAGGAAAGGGAAAAGCACAAGCACAACCAGATGCATTTG
ACACCACTTACCACCTCCACACCATCACCACACCACCCAGCACACCTGGGAAATTATCCC
GCACGACGACAGTCTCTCGATCCGACAAAGCTGACCAAGACCTCAAAGGCCTCAAAGACC
CTGACCCGCGAAAACATGGACCCCCACGAGCTCGAGGACTCCTTTGGAGACCACAGTGAC
GACTCCATTCAGCCCAGCCCACAAATCCAGCAGTCCGGCTTCAACACAAACTCCGCGGCG
TCGTCGTACACCATGCCCACGGAACACACATCGCCCGAGCCGCCTCTGCAAAAGGCTGGC
TCCTCCCCTCCTGCCGAGCAGATTCTCGGTAAGGCTGCATCCAAAAAGGACACGTTCAAA
AAGTTCTTCAAGGGCCCCTACGACTCTCTGTCAGGAGAGCAGACCGAGGGCACGCTCAAG
TACAACAAGCAGGGTGAGGACGAGGAGTACACCGAGGCGCTGACGCGGGAGCTTCACGAC
GACGGCTACGACTACCAGTACAACTACGGCGACCCCTACGGCGAGTCTGAGGATCCATAC
CGAAACGACTCCGTGTCCTCTTTCCAGTTTGGAGACGACAGTTTGAACACAAGCACGGAC
GCAACAACAGCACAGCAGCACCCACAGACACAGAGCCAGACTCCACACGACCAGTCGGAC
GCTCCCCACACAATCCGAGCCACCAACAGACGCTCCGTGACGGGCGGAGGTGTTGCGACT
GTGGTGCCGTCCACCGAGGACATTACGCGCGGCATGGCCAAGAACGGCAAATACCAGCAG
CGCCTGGAGGATGACGCTGCCATTCGGCAGCAGGAGTACGAAGACACCTTCCGTGTCACT
GCCCAGGACGACCGAACGTCTTCTGCGTGGGCTGGAGAAGACGCCGCACACAGACCGCTG
ACGAACCCTCTGTCTCCTGGCCGCACCACTCCCGGTCAGTCCACTCCAGGGTATCTCCTT
TCGCCTGGCCAGGTTACCAACGTCATGTCGCCAGACAAGTCTCCCAACAAGTTCGCCAAT
CCTCCTCCCAACGCCTACAAGCTCAACCTTAGTGGTGTCTCTGATCTAGAGGCGTACAAC
CAAAAGCTTGCGCAAGAGCTCGACTTTGACAAGTACTGCAAGAAGGACGCCAGTCCACGT
GGCCCCGGACCAGCCGCCACGCCTCCTGCAGGTCGGGTGGTGACTAAGGCGCAGTACGAA
AACTACCGACGTGCGTCCGTGGATCTGAATGCCATGAACACAGACGGACCTGGCTCCGGT
GGCGAGAACGGCGACAACTCGGACGACGACTACGCGTACGACGACGACGAGAAGCTGGAG
AATGCTAAGATGCGGGCCAAGCAACAGGCCCACCTTGCTGTGTACCGACAGAAGATGATG
AAGGTGACGGGAGCTTCATCCACGCCGGCCTTCAAGACTCCTCCCATGTCCGGAGGCCAC
AGTTTTGGCGGCTCTGACTCCGAGGATGACCTCGACGACGTGCCTCTGGGAATCCTGCAG
GCCCACGGCTTCCCGCGCGACTCTCAGCGACTCAAAACCATGTCGTCAGACACCAATCTG
TCTTCACACATTGAGCTGGCGGCGTCGCCCATGATGTACTCCAAGAGCGCATCCACGTCG
CCCATGTTCAAGCCTCGGGACTCGGACACTATGTCTGTCAACTCGGCGTCTTCCCGTAAC
ATGCCCTTTGGCCGATCGCGCCTCAGCGGCGTGCCCCATCCTCTGCTGTCCGGACCCCAG
CCCAACCGGGGTCTGGTGGCCGAAATTGCGCGTGAGGAGAAGGAGAAGATCAAGAGAAAG
AGTGGCATGCCCTCTGCCATGTCTATGGGTGGCATGCGGGGCTACGCTGGTTCGTTGAAC
GATAGTAGTAGTATCTACGAAGCCCCTCCTCCTGGCGGTCTGCAGGCCCAGATGGCCCAG
CTCATGCAGATGCAAATGCAGATGCAAATGACCTTGCAGCAGCAGATGCAGGGCGGTGGA
GTACCTGGCGGATTCCCTGGCGGAGGGCTTGCTGGCCCTCCCTCTTCGGCTGGAGCTACC
ACTGCTCCCCCCTCGATCCATGGGCTCAAGCACAGATGGAGCACTAACGATTTGTCAACA
CCCAATCCTCGGTTTGCTAGCGACAACACCTCCATTGCCTCTGGAGGCTCCGGCATGAGT
AACCGAAGCCGGTACAGACCTGGTTTCAACGTGCGGGCCTTCAACCGGTCGGCCACCGTA
CCTGAGTTGGGTCAGCAACAGCGACGCGTCATGTCGCAGACCCACATGCCCGTGTACACG
GAGGATGACGATGACGACGACGACGACGATGGATGGAAGGAGATGGCCGAGCAGCGACGG
GTGCTGCGAGACCAGTGGAGAGAGCGAGGTGCTGTTGCGATTTAGACCCGTTCACTCCAT
TGTCTATTGTTTATATGGGAGGTTGAGCGGCTCATTGAGTCACGGCTCACCAAGGGTTAT
TGACATTGCATATCATTAATATATAAATTGAATTAGATCATTATCATGGACTGGTTGTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18964g_CDS-001

Protein length: 935 aa.
Product: Conserved hypothetical protein

>YALI0B18964g_CDS-001 MLKIFKRHVSKEHKGDGGPSVASPTVTSPSISSPSVSSESLTFNSLKSETHVTGSDSAAH
LPLNLPACEWVLPHFGSSASASDNSSFSWSPQSSPVQQSPSAVQDNGFAGGTAQPKNRSW
SPNLISQEEREKHKHNQMHLTPLTTSTPSPHHPAHLGNYPARRQSLDPTKLTKTSKASKT
LTRENMDPHELEDSFGDHSDDSIQPSPQIQQSGFNTNSAASSYTMPTEHTSPEPPLQKAG
SSPPAEQILGKAASKKDTFKKFFKGPYDSLSGEQTEGTLKYNKQGEDEEYTEALTRELHD
DGYDYQYNYGDPYGESEDPYRNDSVSSFQFGDDSLNTSTDATTAQQHPQTQSQTPHDQSD
APHTIRATNRRSVTGGGVATVVPSTEDITRGMAKNGKYQQRLEDDAAIRQQEYEDTFRVT
AQDDRTSSAWAGEDAAHRPLTNPLSPGRTTPGQSTPGYLLSPGQVTNVMSPDKSPNKFAN
PPPNAYKLNLSGVSDLEAYNQKLAQELDFDKYCKKDASPRGPGPAATPPAGRVVTKAQYE
NYRRASVDLNAMNTDGPGSGGENGDNSDDDYAYDDDEKLENAKMRAKQQAHLAVYRQKMM
KVTGASSTPAFKTPPMSGGHSFGGSDSEDDLDDVPLGILQAHGFPRDSQRLKTMSSDTNL
SSHIELAASPMMYSKSASTSPMFKPRDSDTMSVNSASSRNMPFGRSRLSGVPHPLLSGPQ
PNRGLVAEIAREEKEKIKRKSGMPSAMSMGGMRGYAGSLNDSSSIYEAPPPGGLQAQMAQ
LMQMQMQMQMTLQQQMQGGGVPGGFPGGGLAGPPSSAGATTAPPSIHGLKHRWSTNDLST
PNPRFASDNTSIASGGSGMSNRSRYRPGFNVRAFNRSATVPELGQQQRRVMSQTHMPVYT
EDDDDDDDDDGWKEMAEQRRVLRDQWRERGAVAI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG