YALI0B18788g

Overview

Description similar to uniprot|D5GPV0 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0B18788g

Location

Species Yarrowia lipolytica Positions 2467620..2468607
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 988 (nuc.)
Previous locus YALI0B18759g Next locus YALI0B18810g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18788g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18788gYALI0B18788g_mRNA-001YALI0B18788g_CDS-001

Nucleotide sequence

 

>YALI0B18788g
ATGCCTTCAAATTCAACGTCGAATTCGACCGACGCTTCGGACTTTGACTCTGACCTTCGC
TATGACTATATTGCCAAAGTGATTCTCCTGGGCCCCTCTGGGTGTGGAAAGTCATGTATC
ATGCACAGATTCGTCAAGGGCGAATGGAAGGTGTCTTCTTCGCAAACGATAGGCGTGGAG
TTTGCTTCCAAAATCGTCCGTGTGGGCTCAGGGTCCAACCTGACCAGAATCAAGCTGCAG
CTATGGGACACTGCTGGACAGGAGCGGTTTCGAGCGCTGACCCGTAGTTACTACCGAGGA
GCCGCAGGAGTGGTTCTAGTATACGATACGGTGAACCGTTCCACTTTCAGACAACTTGCC
GAGTTCATTCAGGACGTTAGAAGCCTCACATCTCCTCAAGTGACTATGGTTGCATGTGGA
AACAAAGCTGATTTGATTGAGGAGGCAGATAGAACGTGGATCGTCCCTCCAGCCGAAGTG
CGCACCTTTTCACAGTCGAATCCCGACATCACAGTCACCACTTGTTCGGCCAAATCCGGC
AAAGGCATTGAGGATTTGTTCGACAAAGTGGCTGCTCAGCTCCTGACCAAGATTGAGCTG
GGCGAAATCGATCCAGAGGACATGAACAGCGGTGTACAATATGGAGACGTTCCGCGGTGG
GACCGGTCGACGAAAAAAAGCAGGAAGAAGGATTCCAAAAAGGGTTTCTCTGCGTTATCG
AGGTTTTTTGCAAACAGAGCTGGTGAGGAGGAGATCAAGAAGGACCAGCAGGATAAAGAA
GAGAGTGGCGGAAGGTCTAGTTCCCGCAAGAACTCGAACACGCCGCTGCTACGACGCCCA
AGTACAGTGGAACAGGAACCCATTGAGTTAGATGGGCGAGGGGCAGACTCGAGGGTAGAT
GTAGCCCAGCAGACGAAATCGGGATGCTGTTATTAGGATTATTTATAGGTAATGGGAATG
GGAACGCTGGCCGCGTTCAGTATTAATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18788g_CDS-001

Protein length: 312 aa.
Product: Conserved hypothetical protein

>YALI0B18788g_CDS-001 MPSNSTSNSTDASDFDSDLRYDYIAKVILLGPSGCGKSCIMHRFVKGEWKVSSSQTIGVE
FASKIVRVGSGSNLTRIKLQLWDTAGQERFRALTRSYYRGAAGVVLVYDTVNRSTFRQLA
EFIQDVRSLTSPQVTMVACGNKADLIEEADRTWIVPPAEVRTFSQSNPDITVTTCSAKSG
KGIEDLFDKVAAQLLTKIELGEIDPEDMNSGVQYGDVPRWDRSTKKSRKKDSKKGFSALS
RFFANRAGEEEIKKDQQDKEESGGRSSSRKNSNTPLLRRPSTVEQEPIELDGRGADSRVD
VAQQTKSGCCY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG