YALI0B18810g

Overview

Description weakly similar to uniprot|Q03690 Saccharomyces cerevisiae YMR012w CLU1 translation initiation factor eIF3
Locus type CDS
Locus tag YALI0B18810g

Location

Species Yarrowia lipolytica Positions 2470882..2475450
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 4569 (nuc.)
Previous locus YALI0B18788g Next locus YALI0B18830r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18810g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18810gYALI0B18810g_mRNA-001YALI0B18810g_CDS-001

Nucleotide sequence

 

>YALI0B18810g
ATGACTTCAGAACAAGAGGAGGTTTCTAGTGAGTATGACGACGGAGTGAAGCCGGAGACA
TTGAGAGCAACCGCCAGGGAATTGCAAGCGACACAACCGAACGAGACAGTCCAGTGCGAC
AGACAGATCAATGCTGGATCATTTTCACCCCAGATTTTGTGTTGATTTCTGGGCGACCAT
TTGTGTTATTGCTTCGGCTGCTGACGTCCTATGTAACGAACCAAGCAGCGACACTATCAC
AAGGGGTGCACCGTGGGTCGTGTGCGATGAAAATGGACCTTTGACATTATTTTCCCCACA
CAGCCGACATTGCCCTCAATGAGAGAACATGGACGACGGAACACAAGACGACAGTAGTTG
CAAATGGTGGTGCTAGACTCGAAACTTTATGATACTGGACACTAGTTGCGCTTCTGATCT
GGCGACAATGATGCTTTTGGCAATGCTGACCGCACTGTGACGATTTTTGCTCTATGGTGA
TAGGACAATTTTTAGTCCCATAGTTGAGTCAAACTCAGTAGCGTTGTTGAGTCTAAGTGC
GGATCTCAGTTTAAATCACCAAGTCTTTAATCACCTCAATATCGTGCTGTTTAGCTGAGC
TAAGCTGCCAATTTGTTCTCGGCCATTTTTAGACTGAATTTCGGTCTAGCAGATGTCTTC
AGAGCTGCGGCGTGGCCACTCAAGAGCTGTGTACCGTTCTGAACAAGCTCAGTTTGGCAA
TGTCATAGCTGAAACCAAATTGAGAGAGACAGTTTCACAAGAGCGTTCAACAACTCTTCC
GCAATAGAATCTCTGAACGTGTCCCACAAGCTGATGGCTTATCTGATCTGTCTACTCACT
ACTATGAGACGCTTTTTTGGTACCAGGCTCAACCTCTCTGTCAGTCCCCGCTCGCCTGTT
CATATAACTATGCTCAACTCGGTGTGCACTCAATTTGTTCGCTTCCGTACTAACCCAGTC
CTCACCCTCCAAGTCACCTTTCCCGACCCGGAGCTCCCTCCCCTGTCCCTCACCGTCTCT
CCCGAAGAGTCTGTGCAGGAAATTCGAAACTACATTCGAGACGCCTTTGTCCAGGAGCGA
TGCATCACTTCCTTCACCCTGAACCTCAACGGTCAGCCTATTGACGGATTTGAGAGCCTT
GCTGAGATTGAAGGTCTCGAGTCTGGTGCTACCATCGAGCTCACCAACGCTCCCTACAAC
GAGCATGAGGCCCGTCTGCATGTGATCCGAGTGCGAGAGCTAGCTGGCTTTTCCAACAAC
TCCCACGCCGCTGTGGGCCAGGATGCCGGTATGACCGCCTTCAACCGAACCGAGGGCATC
GACAAGACCCCCAAGGACTACATGCAGGAGGTTGTCGAGACCAAGGCCCAGAAGGAGGCT
AAGGCCAAGCTCAAGGCCGAGCAGAAGAAGGCCAAGGCTGCTGCCAAGGCCGAGGCTCTG
GCCAAGAACGAGGAAGTGTCTGAGGACGAGGAATCGGAGCCTGAGGATGACACTCCCATG
AAGCAGTCCACCCAGGTTCTTGAGGAGAACTCTCCCATGCACGGCTTCAAACTCGAGGAG
TCCAAGTCTCTGCAAGAGCTGTTCCCCGACCGACAGAACCTGCCTGCTCCCGCTCTGCTG
TCTCTCCACCTCTCACACTGGAACCCCCCCACCCAGGCCCAGCAGCTCAACGGCGAGCTT
CTGTATCTCCAGTGCGCCACTCTGGAGGGCGAGTCGTACCAGATTGTGGCACACACCAAC
GGTTTCTACGTTGCCAACTCCACTCTGGGCTCTTTCGACCCCTCTCCCAAGCCTCTGATG
GTCAAGACCAAGGCCAAGAAGCAGAACGGCGGCAAGAAGGGCGGCAAGAAGACTGAGACC
GAGATCTCCTACGTGCCCATCACCACCGAAAACATGCACCACTCTCTCTACGACCTGCTG
GTGTCTCTGTCCGACAAGTTTGCTAAGAAGATTGCCTCCAACTACGCTGAGCTCAACGCC
GCTGGTATGCTCTCCGTTGTGCCCCCCACCAACTGCTTCCTGGCCAACCCCTGGCTCACC
AAGCCCGCCGGTTTCCGACGACCCGATATGGCCCGAAACCAGGAGCTGCTGTCCCTCAAG
AACCTCGAGGGCCAGGACGATACACGAGAGTGGTCCGAGGACCTGCAGTCGCTCAAGGAG
CTGCCCCGAGAGACCATCAATGACCGGGTGGTGCGGGAGCGACATCTCAACAAGACCTAC
TTTGACTTCACTGAGGCTGCTGTCGCCGGTGCCGTCCAGGTTGTCCATGGCGAGATTCAG
CCCATCAATCCCTCTGAGCCCGAGGCCTCCCACATCTTCCTCCACAAGGGTATCTTCTAC
TCTGTTGGCGCCGACGGATCTGGCACTTATGCCGAGATTGGAGGCGACGAGGCTGCTCGA
GTGGCCTCCGCCAAGGACCTCCAGGCTGTCCAGCAGCTTGTGCAGTTTGACTTCCCCGAG
ATTGCCTCTCTGTGCACCACTGTGGTGGACTACCAGGGCAAGCGAATTGTCTGCCAGTCC
CCTGTCCCCGGTATCTTCAGACAGCCCGAGAACGCCCCTCCTCAGGTCAAGTACGGCTCT
GTCGAGGGTGCTGAGGAGATTGCCTCCGAGCAGGAGTTCGGAGACGCCTTCAAGCCCATC
GCTGCTGCCTTCCGACTCAAGACCCACACAGTCAAGGACGCCAACAAGGAGCACTCTCTG
CACCTGGCTTCCGACTGTAAGGGTCTTGCCGGTACTGACGGTCGAAAGTACCTGCTTGAT
CTCTACCGACTTGCTCCCGTCGACATTGCCTTCCTCGATGCCAACCCCTCGTACCCTCAC
CAGCTTGCTCTGCTGCGATTCGAGGCTGTCGAGGCCTACTTCCGACACCAGGTTCGAGCC
GAGATCAAGAAGCAGTCTCTGGATGAGGACGAGACCCCCAAGTTTGAGGTCGAGCCCTTC
TACCTCAACCCTGACGCCTTCGTTCTTCCTGCACCCAAGGAGGATGAGGACGCTGTGCGA
GCTGCCTCCGAGTTTGTCTCCAACACTATCATTCCCGAGCATGTGGAGGCTGTGATTGCC
GGCTTTGGCACCACTCCTATCGACGGCCAGCAGCTGACCCAGTCTCTGCACGGCAAGGGT
ATCCCGATGCGACACCTTGCCTCCGTCATTGCAGCTGCCAAGAAGAGCGACACTTCCAAG
GCCCAGTTCCTCGCCGAGCTGTGTGAGCAGGAGATTGCCGTGCGATCCGCCAAGCACCTG
CTGCGAAACGAGATGGCCAAGAAGGGTGCCAACCCCAAGTACGTTGTTGCTCACGTCATG
AACCTGCTGCTGGGCTCCACCTCCAAGGTGTTTGATACCCCCGCCGGTCTGCTGGCTGTC
TCCGACTCCGTCAACCTTTCGGTCGACGAGGCCAAGGCTGCTGTTGCCGCCATTGCCAAG
ACCCGATTCGGCTACGACCTCGATACCTCAATCTTCGCCAAGCGACCCGTCCAGCTGCTC
CGAGAGCTGTCTGGAAAGCTGGGACTCCAGTTCCTGCAGAAGGAGTACGAGTTTGGTGCC
GAGCCCTTTGCCGTCGCCGACGTGGTCAACATCCTCCCCGTCTTCAAGACCACCACCTTC
CGATCCAAGCTCGTGGAGGAGGCTCTGGAGGCTGCCCGAAACTCCGTCAACACCGACAAG
GACGTGGCTCTGCAGCTGCTGCGAGAGTCCATTCCTCTCGCCGAGCAGGTGTACGGCTCC
GTTAACCCCGAGCTCACCAAGGTGTACAACACCGCTTCTTACCTGGCCTACGAGATGGAC
GAGGCTCTGCTGGCTGCCGATCTCGGCCGACGAGCCTGCATCATGTCCGAGCGATGCTCC
GGAATCGACTCTGTCGACGCCATTCTCAACTACCTCAACCTGTCGTTGTTTGAGCACGCC
ATCGGCAACTACGTCGGTGCTCTGCACATGATTAAGCACGCCGTTTCCGTGTGGGTCACC
GTGTGCGGCACCCATCTGCACCCCGATATCATCACGTCGCTGTCCAACGCCATCACCATG
CTCACCACTCTCAAGCGATGGAACGAGTCGCGACAGTGGCTGGAGAAGACCATTGTTATC
ACTGAGAGTGTGGCCAACGAGAAGGCGCAGGCCCCTCTGCGGTTCCAGCTTGCCCAGACC
ATGTGCCACGAGCAGCAGTACAAGGAGGCTACCGATGAGCTGCGACGAGCCCTCAAGCTC
TTTAACGCTCACTACGGTGAAGACGACCAGAACACCAAGGACTGTGCCGTGTGGCTCAAG
TCTCTGACCCAGGCCGCCGTCTCTATCCAGCGACAGAAGCTGTGGGAGCAGGAGCAGGGC
CGACTGGCTCGACAGGCTCCCAAGCCCACTGCTACTCATCAGAAGGAAGCCCCCAAGAAG
GCTTCTAAGAAGACCAAGGGCAAGGGCAAGGGCAAGGACGACAAGGGCGAGAAGCTCGTT
GCCGAGCTCAAGAAGAAGAAGGCTGGAAAGCGTTAGTTAGTGTGTAAATAGTATGGCCCG
TTGGTGTCAGCCAGCAGTCGTGAAATGAATGTATGTAGCAATGGCCAAGTCATTGTGATT
AGTTGATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18810g_CDS-001

Protein length: 1182 aa.
Product: Conserved hypothetical protein

>YALI0B18810g_CDS-001 MTSEQEEVSILTLQVTFPDPELPPLSLTVSPEESVQEIRNYIRDAFVQERCITSFTLNLN
GQPIDGFESLAEIEGLESGATIELTNAPYNEHEARLHVIRVRELAGFSNNSHAAVGQDAG
MTAFNRTEGIDKTPKDYMQEVVETKAQKEAKAKLKAEQKKAKAAAKAEALAKNEEVSEDE
ESEPEDDTPMKQSTQVLEENSPMHGFKLEESKSLQELFPDRQNLPAPALLSLHLSHWNPP
TQAQQLNGELLYLQCATLEGESYQIVAHTNGFYVANSTLGSFDPSPKPLMVKTKAKKQNG
GKKGGKKTETEISYVPITTENMHHSLYDLLVSLSDKFAKKIASNYAELNAAGMLSVVPPT
NCFLANPWLTKPAGFRRPDMARNQELLSLKNLEGQDDTREWSEDLQSLKELPRETINDRV
VRERHLNKTYFDFTEAAVAGAVQVVHGEIQPINPSEPEASHIFLHKGIFYSVGADGSGTY
AEIGGDEAARVASAKDLQAVQQLVQFDFPEIASLCTTVVDYQGKRIVCQSPVPGIFRQPE
NAPPQVKYGSVEGAEEIASEQEFGDAFKPIAAAFRLKTHTVKDANKEHSLHLASDCKGLA
GTDGRKYLLDLYRLAPVDIAFLDANPSYPHQLALLRFEAVEAYFRHQVRAEIKKQSLDED
ETPKFEVEPFYLNPDAFVLPAPKEDEDAVRAASEFVSNTIIPEHVEAVIAGFGTTPIDGQ
QLTQSLHGKGIPMRHLASVIAAAKKSDTSKAQFLAELCEQEIAVRSAKHLLRNEMAKKGA
NPKYVVAHVMNLLLGSTSKVFDTPAGLLAVSDSVNLSVDEAKAAVAAIAKTRFGYDLDTS
IFAKRPVQLLRELSGKLGLQFLQKEYEFGAEPFAVADVVNILPVFKTTTFRSKLVEEALE
AARNSVNTDKDVALQLLRESIPLAEQVYGSVNPELTKVYNTASYLAYEMDEALLAADLGR
RACIMSERCSGIDSVDAILNYLNLSLFEHAIGNYVGALHMIKHAVSVWVTVCGTHLHPDI
ITSLSNAITMLTTLKRWNESRQWLEKTIVITESVANEKAQAPLRFQLAQTMCHEQQYKEA
TDELRRALKLFNAHYGEDDQNTKDCAVWLKSLTQAAVSIQRQKLWEQEQGRLARQAPKPT
ATHQKEAPKKASKKTKGKGKGKDDKGEKLVAELKKKKAGKR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG