YALI0B18634g

Overview

Description weakly similar to uniprot|Q12234 Saccharomyces cerevisiae YOR216C RUD3 Golgi matrix protein involved in the structural organization of the cis-Golgi
Locus type CDS
Locus tag YALI0B18634g

Location

Species Yarrowia lipolytica Positions 2444887..2446726
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1840 (nuc.)
Previous locus YALI0B18612g Next locus YALI0B18656g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18634g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18634gYALI0B18634g_mRNA-001YALI0B18634g_CDS-001

Nucleotide sequence

 

>YALI0B18634g
ATGGGCAAGAAGAACAAGAACAAGAAGGCCGCGTCAGCGGCTCCTGATAACGCAGCTGCT
GAGGACGTTGTTGTTGAGGATACCAACGTTCCGGAGACCCCTGTTACCCCGGAAACCGAG
TCCAAGAAGGAGACTGTTGAGACCAACGGATCTTCTCTGGAGGAGCAAGTTGCGGCTCTG
AAAGAGCAGCTTTCGACAACCACAAAACGGCTGGAGGTGGAGCGAGATGTGGCCGTGAAG
CGCAAGGAGGCTGAAATTGATCAGTTGAAGAAAGAGATGGAAAGCGGAGATAGGGACGAC
AAGGTCAATGAGGAGCAGGTGGCTCAGTTGAAGCAGCAGATTGAGGAGTATAAAAAGTCC
AGTTCCCAATCTGAGGGGGAGGTGAAGAAGCTGCAAGGACAATTGGAAGAGGCTAAGAAG
GGAGGAGATAAGGAAGTGTCTGGGCTAAAAAAGGACCTAGCGGAGGCTAAAAAAGAGGTC
GAAGAGGCTCATAAGAAGACAGAGTCGTTGAAATCACTTGAGAAGGAAGTATCTGAGCTT
AAACAGAAGTTGCAAGAGGCCGAGTTGGCGAATTCTTCCTCTGACGAAGTCGAAAAGCTT
CAGAAGAAGGTCTCTGAGCTTGAGCTGGCGAACTCTGACACCAGTACTACCAATTCTACA
GAAATTACCTCCCTGAAGGAACAACTGGAGGCGAAAACGGAACAGTATGATAGCTTGCTG
GACCGAATCACACAAATCAAATCCACCCTGGGCGAACGACTCAAGTCGGATGCCGCTGAG
TTGGCAGACACACGTGAAAAGCTTGAAAAGGAGTCCGAGAAGGTTGCTCTTCTCAAGGAC
GAGCTCGTTGAGCAGTCTCAGGAGAGTAAGAAGCTTAACCAGGAGCTCAAACAGGCACGG
GAGAAGTTCCAGAGTGAAATTGACGGACTGTCACGTGAACGAGATTTGTTGAAACGTGAG
ATTCTAGTCGTCCAGGAGACCGCGAACAAGTCTCAGGGTGCGTCTTCCAAGTATGAGATT
GCTCTTTCTGAGCTCAAGACGGTGAACTCAGATCTGGAGACCCGAAACAGTGTTCTGCAA
GACGAACTCACCGCCCTGAAGAAGTCGGTGCAAAGATATATCGCAGAAAGGAAGGACCTT
GAAGACCAGGTCGAAGAACTCAAGAATGAGAAAACTTCCAGTTCGGGGGAGCTCGAGAAA
CAGATTCTGGAACACAAGACAGTGTCTGACAGTCTTAGGAAGGATCTGGATAGCGCCCTC
AAGGAGACAGAAGAGCTCAAGAGTGAATGCAAGAAGCTGGAGGATAAGCTGGCGTCTGCT
TCAGACTTTGAGAAGGAATCCAAGGACAAGTCTCTGTTGATCGGAAAGCTGAGACACGAG
GCTGTGATTCTCAATGAGCATCTCACTAACGCTCTGCAGATGATCAAGAAGAGCTCAGAG
GGTGATACAGTCGATAAGCAGCTGGTATCCAACCTCATTCTGTCCTTTGTCTCTTTATCG
AGAGGAGATACTAAGAAGTTCGAGGTGCTGCAGTTGATCTCCAATTTCCTGGAGTGGGAC
GAGCAAGAAAAGGTCCAGGCTGGTCTTTCCAGATCGTCTTTCGTAACAGATGGAAAGCTA
GAGAAAAGCAGTAGTTCCACTCAGTTGAGTGGACAAGGGGGGGATAGACAACCGGCAGTT
GGCTTCTTTGGCAAGTTTGCTGAGTTCTTGGATCGGGAAGCAGGTAAGAAGTGACCACCG
GGGACGATGTGATGATGATATCTTACAAAAGGAGGGGTCAGTGGCTATAAGTGCCCATTG
GCAAGTACATAAAAATCAAATGTATGATTGTTTTTATAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18634g_CDS-001

Protein length: 578 aa.
Product: Conserved hypothetical protein

>YALI0B18634g_CDS-001 MGKKNKNKKAASAAPDNAAAEDVVVEDTNVPETPVTPETESKKETVETNGSSLEEQVAAL
KEQLSTTTKRLEVERDVAVKRKEAEIDQLKKEMESGDRDDKVNEEQVAQLKQQIEEYKKS
SSQSEGEVKKLQGQLEEAKKGGDKEVSGLKKDLAEAKKEVEEAHKKTESLKSLEKEVSEL
KQKLQEAELANSSSDEVEKLQKKVSELELANSDTSTTNSTEITSLKEQLEAKTEQYDSLL
DRITQIKSTLGERLKSDAAELADTREKLEKESEKVALLKDELVEQSQESKKLNQELKQAR
EKFQSEIDGLSRERDLLKREILVVQETANKSQGASSKYEIALSELKTVNSDLETRNSVLQ
DELTALKKSVQRYIAERKDLEDQVEELKNEKTSSSGELEKQILEHKTVSDSLRKDLDSAL
KETEELKSECKKLEDKLASASDFEKESKDKSLLIGKLRHEAVILNEHLTNALQMIKKSSE
GDTVDKQLVSNLILSFVSLSRGDTKKFEVLQLISNFLEWDEQEKVQAGLSRSSFVTDGKL
EKSSSSTQLSGQGGDRQPAVGFFGKFAEFLDREAGKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG