YALI0B18612g

Overview

Description similar to uniprot|P32559 Saccharomyces cerevisiae YMR023c MSS1 mitochondrial GTPase involved in expression of COX1 singleton
Locus type CDS
Locus tag YALI0B18612g

Location

Species Yarrowia lipolytica Positions 2443350..2444863
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1514 (nuc.)
Previous locus YALI0B18590g Next locus YALI0B18634g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18612g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18612gYALI0B18612g_mRNA-001YALI0B18612g_CDS-001

Nucleotide sequence

 

>YALI0B18612g
ATGCTGCGAAACACAAAGAGCACCATTTATGCGCTCTCTTCCGCCTCGGGAAGGGCCGCT
GTCAGCATCATTCGAGTCAGTGGACCAGACACCAGTACCGTCTACAAGCAGTTGACCAAC
AGGACTAAGACGCCTCCTCATCGTGTAGCTACCCTTGCTACGTTGAAGCAGCCGTTTTCC
AACCCTCCAAAGGTCTTGGATCATGCCCTTACTCTCTTCTTCAACGGTCCAAAATCATAC
TCAGGAGAAGATCTGCTGGAACTTCATGTCCATGGAGGTCCAGCAGTCGTGCGAGCTGTT
TTGGACTCCATTCAGCGTGTGAAACCCAGCAGTGGAGTTCCTATCCGGTACGCTGAGCCA
GGAGAGTTCTCAAAGCGTGCCTTTTACAACGGAAAGCTTGATATGACCCAAATCGAAGGA
ATCGGAAGCATGATTGAAGCTGAAACAGAGAGTCAACGTCAGGCATCGTTAGAAGCATCG
TCTGGACACAGCAAAAAGGTCTATGAAGCCTGGAGAGAAGGAATTGTGGAGAACATGGCG
TTGTTAACAGCTCTGATCGACTTCTCAGATGACAACCAGGGTATAGATAGTGGTGAGGTT
CTGGTGGGAAAGACAAAAGAGAATGTTGGTCGTCTGCTAAAGGATATCAAGAATCATCTG
GCTCAAGTTCAGCGGTCTGAGATTCTGCGGTCGGGTATCGTCATGTCCCTTCTTGGAGCG
CCCAATGCCGGAAAGTCGTCTCTACTCAACATTTTGGCTAAACGGAACGCTGCTATAGTT
TCAGAAGAAGCAGGAACTACTCGTGATGTTGTGGAGATTGGTCTGGATGTGGCTGGATAC
AAGGTAGTTCTTGGAGACACTGCAGGACTAAGAGGAGGAGAACAAGTAGGCATGGTGGAA
AAGGAGGGAATCAAAAGAGCAAGAGAACGGTTCCAGAAAAGTCACATGATTATGGCTGTT
CTCCCCGCTGATGGTTGTGACCACAGCAGCGACATCATTGCTGAGCTCAAACAATTGCAT
GCTGCAGAGAAGCAAATAGTCGTGGCTATCAACAAGACTGACCTGGTTGAGGATCATGTG
GTTGAAGCTTTTAAAAACAGACTCATGGAAGAGATCGGTCTGCCTCGCGATTCCATCATT
CCGGTCAGTTGTATTGCCAGCTCTGGTCTCGAGACTCTCCTCGCTAAGCTGTCCTCTGAA
TTCTCCAAAATTACTACAATTGAAGGCTCGGATCCCGTGCTTGCCAGTCAGCGAGTCAAG
GACAATCTGATCGCCACAGTAATCCCCGCGTTGGAGACATTCATGGAGTATGATCTAGAA
GCCGTTGTCTTTGCCACAGAAGAGCTGAGAATGGCAGCAGAAGGAATCGGTATGATTACT
GGCCAGGGTATTGGCATTGAAGAGGTTCTCGGGGCTGTTTTCAGCAAGTTTTGTATTGGA
AAGTAACAGACAGTCAAGCTGCGGATTCACTGCTCCAAATGTAAATAGTATATGAATGGA
TCTTACATCACCCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18612g_CDS-001

Protein length: 482 aa.
Product: Mitochondrial protein, putative

>YALI0B18612g_CDS-001 MLRNTKSTIYALSSASGRAAVSIIRVSGPDTSTVYKQLTNRTKTPPHRVATLATLKQPFS
NPPKVLDHALTLFFNGPKSYSGEDLLELHVHGGPAVVRAVLDSIQRVKPSSGVPIRYAEP
GEFSKRAFYNGKLDMTQIEGIGSMIEAETESQRQASLEASSGHSKKVYEAWREGIVENMA
LLTALIDFSDDNQGIDSGEVLVGKTKENVGRLLKDIKNHLAQVQRSEILRSGIVMSLLGA
PNAGKSSLLNILAKRNAAIVSEEAGTTRDVVEIGLDVAGYKVVLGDTAGLRGGEQVGMVE
KEGIKRARERFQKSHMIMAVLPADGCDHSSDIIAELKQLHAAEKQIVVAINKTDLVEDHV
VEAFKNRLMEEIGLPRDSIIPVSCIASSGLETLLAKLSSEFSKITTIEGSDPVLASQRVK
DNLIATVIPALETFMEYDLEAVVFATEELRMAAEGIGMITGQGIGIEEVLGAVFSKFCIG
K*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG