YALI0B03168g

Overview

Description weakly similar to uniprot|Q07807 Saccharomyces cerevisiae YLL013c transcript-specific regulator of mRNA degradation
Locus type CDS
Locus tag YALI0B03168g

Location

Species Yarrowia lipolytica Positions 465582..467257
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1676 (nuc.)
Previous locus YALI0B03157r Next locus YALI0B03190g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B03168g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B03168gYALI0B03168g_mRNA-001YALI0B03168g_CDS-001

Nucleotide sequence

 

>YALI0B03168g
ATGGTTGACTCCGAGACGAAACCAGAGGGCGTCCTCAACAAGGCGGACGTGCCCGCAACC
TCTGAAGTACATCCGACCCCACAACTGCCAACCACCGACAAGACCAGTGACACCCAGTCC
ACCAACAAGACACGGTCCATCGCCACACGCAGACACACAGGCAGCACTAGCAGCATCACA
GGCGTTTCTGCGACAGCCTCTCCTGACATTACAGCCACCACAGTGCCTCCATCAGCACCT
CCCCCTACCACTACCACTACCACAACCACACCCACAATCACAACCACAACCACAACCACA
ACCACAAACACAAACACAACCGCACAGCCACCACCAACAAACACAGACGTGGAGGGATTC
GCCACCCCGGCATACACGACGGGCGTCTCTGCCTCTGGTATTTCGACCTCGGAGCTCGCG
GAGTCGATATCCGAGTCCGTTGAAGACTCAAGTGCAGTTGAGGAAGCCGAGTCCGAACAG
AGTGACTTTGGTTCCCAGCGACGACGTGAACGGGGCAACAACAGAGTCAATTTTGTCATT
CCGGAATACACCTCTCATGTGCAAGCGGCTCGTATCGTAGACGTGACTGATACGGCCGAA
AAGGCGGACATTTCCAGCGCAACCCGCAAGGACCACGAAATCGACACAAACTTCTTCAGC
AGCACCGGCACAGGAACAACTACTGCGTCCACGACATCTGACGAGACTGACGGCGACCGC
CTCTCGGAAGGAGGAGCTCAGCAGAACCATTTTTCTGAGGGACACCAGTTCCGACGACGA
CGACGACCGCTGCCACCACACCTCAAGGCTCTGCAACAGAACATGCTTAATGAATTGGGC
CAGATTCAAGTGGTCCTGGAGAACCGACGAGTCCAGACCATGATGCATAACAGGCAGCAA
CAGGAACGGGCGAAGCGAGATCGAATGGAACAGCAGCAGCAAGAGCAGGAAGCTGCCGCT
GCCGCGGCTGGTGGCAATCACAGTAACGCAAACCTCAATATCGACAACTCGTTTCTCGCA
AACCGAATCAACACAATCACCAGTCGTCTCAAGACCTCTTCTGACACTACTGAGGTGGCA
TCTCCTCCAGGAACACCTTTGCATGACTAAATTGATGTCGTCACACTCCCACCATGACAT
TGGTTACCTCTCTTGAAGCATACTCCCTCCACCTCTCCCCCCTTCCCCCCTCGCCCGCAA
TCCTCCGCAATTACACCAATACTTTCTCTACTCGAGAAGCCCACGCGCAGGTACCATGAC
CGTTACTCCCAATGGTCAGCATAAGTTATTCATATTACCCGTTTTATCAATCTCTTTTTA
TTCTCGGATTCTTAACCCGTTTTCTCTTGCATCTCTTTTCACATGTACGAGTACTGTACT
TGTATGTTGCTCGCTCGGCACTTTCACTTCACATGTGCTTCTCTCAAGCTTGTGATACTT
GTTCATATTACCCCCCTGGTCACAATGGCTTCTTTATATTTTTCCTGTTGCCATTAGGAA
CGTCTCTTACCTGGACACAGTGTTCCTCGTCGTGCATCTTTTCTGGCGACGTGTGACTGG
AAAGATATCTTTTCACTTGTTTGTTGTGGGCACAATAAACATTTTGTAGATAGCTAACAT
AGACTGTCGGCCGCGGCGTATACTCGCACACTTCATAAATGGCATGTATTGATGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B03168g_CDS-001

Protein length: 370 aa.
Product: Conserved hypothetical protein

>YALI0B03168g_CDS-001 MVDSETKPEGVLNKADVPATSEVHPTPQLPTTDKTSDTQSTNKTRSIATRRHTGSTSSIT
GVSATASPDITATTVPPSAPPPTTTTTTTTPTITTTTTTTTTNTNTTAQPPPTNTDVEGF
ATPAYTTGVSASGISTSELAESISESVEDSSAVEEAESEQSDFGSQRRRERGNNRVNFVI
PEYTSHVQAARIVDVTDTAEKADISSATRKDHEIDTNFFSSTGTGTTTASTTSDETDGDR
LSEGGAQQNHFSEGHQFRRRRRPLPPHLKALQQNMLNELGQIQVVLENRRVQTMMHNRQQ
QERAKRDRMEQQQQEQEAAAAAAGGNHSNANLNIDNSFLANRINTITSRLKTSSDTTEVA
SPPGTPLHD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG