YALI0B02596g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B02596g

Location

Species Yarrowia lipolytica Positions 397155..398489
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1335 (nuc.)
Previous locus YALI0B02574g Next locus YALI0B02618r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B02596g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B02596gYALI0B02596g_mRNA-001YALI0B02596g_CDS-001

Nucleotide sequence

 

>YALI0B02596g
ATGAACCTACCAAACGAGATTATCGAAATGATATTCAGACACTCTTCTGTTGAGACGTGT
GTTGTTCTCAGCCAAACATGTCGTTCGTTTCGAGACATGTATCAGTTCTCCGAGAGCTTA
CTCAAGCAGAAGCTGCTAGCCAGATGCCCCTGGCTGCGTATAAAGGAAGACGGAGTTGAA
ATAGAGACTTGGGGTGAACTTGCATATGTCTTTTGTGCTCGGGTTCGCACCACTCACCCT
CCGCTAGGACCTTGGTCTATCGAGGGCCTCTTTTACCATGAAAAGGGACCGTGGGAGCAC
GTGTTTGGAAACATGGCCCAGGGTAGGGTCCTTCAACCTCCTCGATTTATGATCCCTAAG
TCTCCGGAAGACGACATTGTCGAGATTGATACTACCTACCAGTTTCCTTATGCTCCTGAC
TTTGAAGCGATTCATCATAGGCCAGTTGCTGAAGGTGAATATCTAGAGGGAAACAAGATG
ATAATCACCAACTCCAACACCGGAGTATTTGGCGGCCAGGTTTCTGTCAATCTATCAACT
CTGGAAATCAAGCCAGTTGCTGAACCCATTTTTGTCAACAAGGTCGTTCGGGACGATCCC
ACAGGGCAGACCTATTACGACTATCTGGGAACACTGGTGCCTGTACCCGAAGGAACTATT
CATGTTACTGAACATGTGAACAATAAAGAAGTTTTGTTTGTCACAGGACATGTGTTCATC
ATGGTGCCCCTCAAAAACGGCCAACTGCAGGTCGACAAGAGATTCTCCTTCTCCATGATA
GGGGCGTATATGATCACCCAGTTTCACGACTCAACATTCATCACACAGGCAACTACAAGC
AGTCAGAGGATCTACTACATCAACCACCAGACTCGGGGGCTGACTACTGTTCTTGCAACC
ACCAATGGGCTGTTTGGAGGAGACCACTGGGAGAAGTTTGCTCTTCACAATGGCCTACTT
TGGCACTTTCAGCACAATACTTTGGTTCCTTACCAGGTTGACCTTGAGCACATGGACGAC
TATGGATTCGCTAGTATCCGAATGAGGGCAGATTGGCGTATTTCCTGTCATACACACGGC
TTTCCTACGGGCCCTAAATTGTTACAACGGCAAGACAAACTACAGAGGTTAGTCAGTTTG
GTTTCTTTCCCCGATATGGTGTTTGACTTGTCTACTCGAACGTGCTACAAGCAGAAGAAA
ATGGCTACCGATCTCAGCTATCCACACGATCGATACTTTGCTGGTATTTCAGATGGCGTC
ATCAGGTTCTGGAGATGGAGACGGACCACCGGAGCCTTTGATCTCCCTGAAAACCAGCAT
GTTATTCATTGGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B02596g_CDS-001

Protein length: 445 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B02596g_CDS-001 MNLPNEIIEMIFRHSSVETCVVLSQTCRSFRDMYQFSESLLKQKLLARCPWLRIKEDGVE
IETWGELAYVFCARVRTTHPPLGPWSIEGLFYHEKGPWEHVFGNMAQGRVLQPPRFMIPK
SPEDDIVEIDTTYQFPYAPDFEAIHHRPVAEGEYLEGNKMIITNSNTGVFGGQVSVNLST
LEIKPVAEPIFVNKVVRDDPTGQTYYDYLGTLVPVPEGTIHVTEHVNNKEVLFVTGHVFI
MVPLKNGQLQVDKRFSFSMIGAYMITQFHDSTFITQATTSSQRIYYINHQTRGLTTVLAT
TNGLFGGDHWEKFALHNGLLWHFQHNTLVPYQVDLEHMDDYGFASIRMRADWRISCHTHG
FPTGPKLLQRQDKLQRLVSLVSFPDMVFDLSTRTCYKQKKMATDLSYPHDRYFAGISDGV
IRFWRWRRTTGAFDLPENQHVIHW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG