YALI0B02544g - ABC3

Overview

Description uniprot|Q6CFY4 Yarrowia lipolytica YALI0B02544g ABC3 Plasma membrane ATP-binding cassette (ABC) transporter
Locus type CDS
Gene name ABC3
Locus tag YALI0B02544g

Location

Species Yarrowia lipolytica Positions 383428..388228
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 4801 (nuc.)
Previous locus YALI0B02486r Next locus YALI0B02552g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B02544g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B02544gYALI0B02544g_mRNA-001YALI0B02544g_CDS-001

Nucleotide sequence

 

>YALI0B02544g
ATGACAGATCCTGTACCGATCACGCAGGATCCGACCATCTACTCGAGTCAGCAAGACGCC
GAGATCCGGTCGTTGGCCGAGTCCATTCACTCACAGCATTCCAACAATTCCAACAACTCC
ACAGAGCTTACCAACCCGTATGTCGATACCTCTGATCCAGAGCTCGATCCCTGGAGCGGC
CAGTTCAACAGTCGGAAATGGTCCAGGACAATTTTGGGTCTGAAACGACGATATGGCACC
TCCAAGGAGATCACTGCCGGCGTGTCTTTCAAAAACCTCGGCGCCTATGGATATGGTGGA
GGAGCCGATTACCAGAAGACTGTGGCCAACGCAGTGCTAGGTCTGGAGGGCGTTGTGCGT
ACTCTTTTCCATCTGGAGAAGAAGGAAGATAAGGTGCAGATTCTCTCTGACTTCAACGGT
GTGCTATGGCCTGGGGAGACCTGTGTTGTCCTTGGACGACCTGGTTCTGGATGTACGACT
CTGCTAAAGAGTATTGCTTGCGAGACGTACGGATTTCAGCTCGACAAAGAGACTGAATGG
AATTATCAGGGTGAGTATGGGATTAACAAAGACTGAGTTAAAGCTCGGGCAAGTGGGGTT
TGAAAGTGTGTTGATATTTACAATGTTGAGATGTGCTGATTATATCATTCCAACCACCTT
AGCGAGTGAGAAGAATGAGATAAACTGGAACTTGGAGTGTAACGTTCAACACTCATGAAC
ATTCTTTTCATTGAAGTTGGTACAACACCTCAATTAGCTGCCAGACCGCTCTACATTCAC
TCAATGGATGCTCGTTAATACCTACAGACGACTTTCCATACTGTACTCGAACCATACTAA
CATAGGCATTCCCCGAAAAATCATGCAGAAAACCTGCCGTGGTGAAATCGTGTACAACGC
AGAAGTTGACGTGCATTTCCCTCATCTCACAGTCGGAGACACCCTCATGTTCGCCTCTCT
GGCCCGAACTCCCCAGAACCGATTCGATGGAGTCACCCGAGAACAGTATGCAAAGCATAC
TCGAGACGTGACCATGGCCTCTCTGGGTCTGTCTCACACTCTCGACACCAAGGTTGGAAA
TGACTTTGTGCGAGGTGTTTCTGGAGGAGAGCGAAAGCGAGTCTCTATCGCCGAGAGTAT
TGTCTGTGGATCGCCTCTGCAGTGCTGGGACAACAGTACTCGAGGTCTCGATGCTGCTAC
TGCCACCGAGTTTCTGCGATGGCTGCGTCACTCAGCCGAGCTCACTGGCGCCTCCATGTT
TGTGTCTCTCTACCAGGCCTCCCAGGAAGCCTACGAACTCTTTGACAAGGTGACCGTTCT
CTACGAGGGTCAGCAGATCTACTTTGGTCCCGGTGAGCAAGCCAAGCAATACTTTGAAGA
GATGGGATTCGAATGTCCTCATCGACAGACAACCGGAGACTTCCTCACATCTATTACCTC
TCCTGCAGAGCGAATTGTCGCTCCTGGCTTTGAGGGGAAGACCCCTCGAACTGCATCCGA
ATTTGCTGAGCGATGGAGACAGTCCCAGGCCTATGCCAACCTTCAGGAGGAGATTGAGCG
ATTCAACACCGAGTTTCCCGTGGGAGGAAACCGAGTTGCCGATATCATGGAGCTCAAACA
GGAGAAGCAGAGTGACCATATCAAGGTGTCTTCTCCCTACACAATCTCCATCCCCATGCA
GGTCAAGCTGTGCTTGACCCGAGGCTTCCAAAGACTCAGAGGCGATCTCAGTATGGCTCT
GACCACTGTCTTGGGTAACTTTGTCGTTGCTCTCATTCTCTCGTCTATGTTCTACAACAT
GCCCGAAGACACATCGTCCTTCTTTTCCCGAGGAGCTCTTCTATTCTTTGCCATGTTGAT
GAACGCCATGTCTTCTGTTCTTGAAATCATTGTCCTTTACGAACTTCGTCCCATTGTGGA
AAAGCACCAGAGATACGCCATGTACCACCCCTTCTGTGAAGCGTTAGCGTCAATTATCTG
CGACTTCCCCACCAAATTCCTCACCATGCTTTGTGTCAACGTGACTCTTTACTTCATGTC
CAACCTGCGACGAGAAGCCGGTCCTTTTTTCATCTTCTTCCTCTTCACACTCCTATGTGT
TTTGGCCATGAGTATGATTTTCCGAACCATTGCAGCTGTCACCAAAACTCTTCAGCAGGC
CCTTGCTCCCGCAGCTGTCATTATTCTCGCCCTTATCATCTACACAGGCTTCACTCTCCC
CATTAGCTACATGCGAGGATGGGCACGGTGGATCAACTATATTGACCCGATTGCCTACGG
CTTTGAAGCGGTCATGGTCAACGAGTTCCGAAACAGAGAATTCCCTTGTGCCCTTTTCAT
CCCACAGCAGTCCACATACGACCAGCTGGGATCTCCTTACCAGGGCTGTATGGCCGTTGG
AGCAAAGCCTGGAGAGCGTTTTGTCAACGGAGACCGGTACTTGGAAATGGCCTTTGATTA
CTCGCAGGCTCACTTGTGGCGAAACCTGGGTATCATGTTTGGCTTCATTCTCTTCTTTGC
GTTCACCTACCTGACTGCCGTCGAGTTCATCCAGTCTGCCAAATCCAAGGGTGAGGTTCT
GGTGTTCCTGCGATCTTCTCTCAAGCAGCGAAAGAAGCGAGCTCATCTGATGGATGTCGA
GGCCAATGCTGAGAAGGTTGGTGCAGCTCAGGATAGAGAGATTCTTGTTCAGCAGGAGGA
GGGTCAGCAGGAAGAGACTTCCTCGTGTACCCCCTCCGATTCTACCCCCAAGGATATCTT
CCAATGGAAGGATGTGTGCTACGACATCAAGGTAAAGGGCGGAGAAAAGAGACTACTGGA
TAACGTGGACGGATGGGTCAAGCCAGGTACTCTAACAGCCCTCATGGGCTGCTCTGGAGC
CGGTAAAACCACTCTTCTGGATGTTCTGGCTGACCGAAAGGCCACTGGTGTGATTACTGG
AGACATGCGAGTCAACGGACAGAAGCGGGACGCCTCTTTCCAGAGAAAGACAGGTTACGT
GCAACAGCAGGATCTCCATACTGCTACTTCCACCGTTCGTGAAGCTCTCGAGTTTTCTGC
TCTTCTGCGACAACCTTCCAATGTGCCCAAGGCCGAGAAGATTGCCTATGTTGACGAAGT
CATTGATATTCTGGAGATGCAGGCCTATGCTGATGCTGTTGTCGGTGTCCCCGGTGAAGG
TCTCAACGTTGAGCAGCGAAAGCGACTAACTATCGGTGTAGAGCTTGCTGCCAAGCCTGA
ACTCCTGCTGTTCCTTGATGAGCCCACTTCCGGTCTTGACTCCCAGACTGCCTGGTCAAT
CATCTGTCTGCTGAAGAAACTAGCCAACCGAGGCCAGGCTATTCTGTGTACTATTCATCA
GCCCTCTGCCATTCTCTTCCAAGAGTTTGACCGTCTTCTGTTCATGACTCTGGGAGGTAA
GACTGTTTACTACGGAGATATCGGAGCCAACTCGTCTGCATTGATCAACTACTTCGAGTC
CAAGGGTGCCGATCCTTGTCCTGAAGAGGCTAACCCTGCTGAATGGATGCTTGCTGCTAT
TGGAGCTGCCCCCGGAAGTATTGCCAAGCACGATTGGGCTGTAGTCTGGAACGAGAGTGA
AGAGCGAGCCCGAGAGCGAGATCTGCTTGATAAGATGGCCGAGGAGCTTGCTGCTCAGAG
TACTCATGATGAGAAGAACGAGCTGGTAACCTCCAAGAGCGTCGGAAGCTCCCAGACCTC
CTCTTCGTCATACTCTGCCAAGTCCCAGTACGCCACATCTCAGGCTACTCAGCTGTACTA
CCTTACCAAGCGACTGTGGACCTACTACTGGCGATCTCCCCGATATATCTGGTCCAAGCT
ACTCATGTCCATTGCCTCTGCCCTGTTTATTGGTTTCTCTTACTACAAGGCGTCACAAGA
CATCCAGGGTCTCCAGAACCAGATGTTTGCCTTCTTCATGCTTTTCCTCATCTTCGTCAT
CATCATGGTCCAGATTCTGCCCCATTTCGTGGCCCAGCGAGAACTCTACGAGGCGCGAGA
GCGATCTTCCATGGCTTATTCGTGGCAGGCTTTCATGGGCTCTAACATCCTCGTCGAGCT
TCCCTGGCAGACTCTGGTGGCAGTTCTTGTCTTCTTCTGCTTTTACTACCCCATTGGCCT
GCAGAATAACGCTACTGGCCATCTTGGCGAACGAGGAGCCCTCTTCTTCCTCTTGCTCTG
GTCCTTCTACGTCTACAACTCCACTTTTGCTCACATGATGGGAGCCGCCTTCGAGAACAA
GGAGAACGCAGCCACCATTGGTTACCTGCTCTTTGCTCTCTGTCTGATCTTCTGTGGTGT
TCTGGCCACCAAGGAGGACATGCCCCACTTCTGGATCTTCATGTACCGAGTGTCTCCGCT
GACTTACCTCATTTCCGGCCTCCTCAGTGCAGGTGTCGGAGAGACCAGAGTTGAGTGCAC
CGATAACGAGCTTGTCCTGTTCAAGCCCATGAACGGAACCAACTGTGGAAAATACATGCA
TCCGTTCATGGAGGGTCTTGGACACACAGACATGCCCATGGGCTATCTGGTCGACCCATC
CGCCACCGACATGTGTGGATATTGCCCCATTTCCAACACCAACGGCTACCTTGACCAGAT
TGATGTCAAGTACAGTCAGCGATGGCGAAACTATGGCATTCTGTTTGCCTACCCTGCCTT
CAACGTCTTTATGGCTTTTGCTTTCTACTATATCTTCCGAGTCCCCAAAAAGTCTCGAAA
GCAGAAGGCCTAGGCACTTTCATCCCATTCTTTAATTAATTTTATTCACATATTAATCGA
C

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B02544g_CDS-001

Protein length: 1486 aa.
Product: Plasma membrane ATP-binding cassette (ABC) transporter
Gene: ABC3

>YALI0B02544g_CDS-001 MTDPVPITQDPTIYSSQQDAEIRSLAESIHSQHSNNSNNSTELTNPYVDTSDPELDPWSG
QFNSRKWSRTILGLKRRYGTSKEITAGVSFKNLGAYGYGGGADYQKTVANAVLGLEGVVR
TLFHLEKKEDKVQILSDFNGVLWPGETCVVLGRPGSGCTTLLKSIACETYGFQLDKETEW
NYQGIPRKIMQKTCRGEIVYNAEVDVHFPHLTVGDTLMFASLARTPQNRFDGVTREQYAK
HTRDVTMASLGLSHTLDTKVGNDFVRGVSGGERKRVSIAESIVCGSPLQCWDNSTRGLDA
ATATEFLRWLRHSAELTGASMFVSLYQASQEAYELFDKVTVLYEGQQIYFGPGEQAKQYF
EEMGFECPHRQTTGDFLTSITSPAERIVAPGFEGKTPRTASEFAERWRQSQAYANLQEEI
ERFNTEFPVGGNRVADIMELKQEKQSDHIKVSSPYTISIPMQVKLCLTRGFQRLRGDLSM
ALTTVLGNFVVALILSSMFYNMPEDTSSFFSRGALLFFAMLMNAMSSVLEIIVLYELRPI
VEKHQRYAMYHPFCEALASIICDFPTKFLTMLCVNVTLYFMSNLRREAGPFFIFFLFTLL
CVLAMSMIFRTIAAVTKTLQQALAPAAVIILALIIYTGFTLPISYMRGWARWINYIDPIA
YGFEAVMVNEFRNREFPCALFIPQQSTYDQLGSPYQGCMAVGAKPGERFVNGDRYLEMAF
DYSQAHLWRNLGIMFGFILFFAFTYLTAVEFIQSAKSKGEVLVFLRSSLKQRKKRAHLMD
VEANAEKVGAAQDREILVQQEEGQQEETSSCTPSDSTPKDIFQWKDVCYDIKVKGGEKRL
LDNVDGWVKPGTLTALMGCSGAGKTTLLDVLADRKATGVITGDMRVNGQKRDASFQRKTG
YVQQQDLHTATSTVREALEFSALLRQPSNVPKAEKIAYVDEVIDILEMQAYADAVVGVPG
EGLNVEQRKRLTIGVELAAKPELLLFLDEPTSGLDSQTAWSIICLLKKLANRGQAILCTI
HQPSAILFQEFDRLLFMTLGGKTVYYGDIGANSSALINYFESKGADPCPEEANPAEWMLA
AIGAAPGSIAKHDWAVVWNESEERARERDLLDKMAEELAAQSTHDEKNELVTSKSVGSSQ
TSSSSYSAKSQYATSQATQLYYLTKRLWTYYWRSPRYIWSKLLMSIASALFIGFSYYKAS
QDIQGLQNQMFAFFMLFLIFVIIMVQILPHFVAQRELYEARERSSMAYSWQAFMGSNILV
ELPWQTLVAVLVFFCFYYPIGLQNNATGHLGERGALFFLLLWSFYVYNSTFAHMMGAAFE
NKENAATIGYLLFALCLIFCGVLATKEDMPHFWIFMYRVSPLTYLISGLLSAGVGETRVE
CTDNELVLFKPMNGTNCGKYMHPFMEGLGHTDMPMGYLVDPSATDMCGYCPISNTNGYLD
QIDVKYSQRWRNYGILFAYPAFNVFMAFAFYYIFRVPKKSRKQKA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG