YALI0B02002g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B02002g

Location

Species Yarrowia lipolytica Positions 291705..295647
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 3943 (nuc.)
Previous locus YALI0B01980g Next locus YALI0B02024g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B02002g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B02002gYALI0B02002g_mRNA-001YALI0B02002g_CDS-001

Nucleotide sequence

 

>YALI0B02002g
ATGGGCTGGGGACAACGAACTTTTTCCTTCTCGTCGTACTCGTACACGGGAGTGGGCCAG
GCACATCCTAGCCAACCGGACGTGAACTCCATGGCCCGAGCAGCAGCGTCGTCTGTCGGC
AGCAACCCCAACGAGCGGGCCAACAGCGGCCTGTCTTCTGCGGCAGCGGCGGCGGCCATC
CGACACCACTCGCTGACCTCGTCCACCAGTCAGCCCAACCTGCAGCAGGGCCGCAACGGC
AGCATGCGTGGAGGCCGAGAAGGCCGAACCAGCTCTCTGCTTGGCGGCCGAACCAACTCG
CTTATGGGCGGACGAAAGTCGTCGCTCCGAGGCCAGAACGGCGGATTCGCTTCCGTCAGC
GGCACCAACGCCTCCGGCCGAGCGCCAGACCTCATTGAGGAGGAGAGCGGCTCTGTTGGC
GACCTGCCCAATGTCAGAAAGGGAAAGCGCGGAACTCGAACATACTCGCTGACCACACCG
TTTGAAGGGTTCGAGGACGGAGGCATTGGCCAGGGAGCCTCGCCCGCCATCTCACCCAAC
AACTCCATCACGTCCGTTTCTTCTCCCGGACGAACGTCCTCGCTTCGACACTCTCTGCGT
GGCGCCCCCTCTTCCGGCTCGCTCAGAAGAGGCTCCATGACGTCAACCACCACAAACACA
GAGCGAACCCACTCGCTCACGTCGACCACCACAACTATCAAGCGAATGGGCTCGTTTCAC
GTCATCACCACAAAGACCCAGGAGGTGCCTGCTGGTGGCAAACCTCCTGCTCGAAGCCGT
CTGTCGCAGGGCGGCACAAAACCTGCCTACCAGACACGCGACCTGCTCACCCAGCAACGC
CAGGAGCGAGAGGCCCGACAGCAGCAGCTCAACAAGGCCAACCGAGCTAAGGCACAGAAG
GAGCAGCGACTACGACAACAGCAGCAGGTCCCTGTTGTGAAAGAACCCGAACCACCTGCA
TCTCCCATCCACTACGCTTCGTCCGTGCTGTCGTACGAATCCGACCTCAACACCGTGTCT
GAGTACCCAGAGTCGTCCCTGACGTCCCCCAACGGCTCTGTTGGCTCCGGCAAGCGACAC
ATGCCTCCTCCGCGAACGCTGTCGCCCATGAAGCCTGCGCTCAAGATGTCCGAGTCGCCC
CGCAACTCGTTCACCCAGGACACCAACTCGCTGTCACCCCATTCGTCTATCGACTCGCCT
AGCCGAACACGCAAGCAGCGAGTCTCCTTCTCCTCCGAGAGTGAGAGCAACTTCATTGCA
CAGGAGTCGCAGCGACAGAAGGCACTCCTGTCGTTGCCTCAGCAACAGCCTGCCAAGCAG
CCTCTGCAGCCTCGGCCCAAGCAGTATTCTCCCGGAACTGTTGTCCCCGTGAGCAACAAC
CAGCTGGCTAGCAACGGTTTGCCTAAGGTGGTCAAGACTCCCGAGCGACAGTCGCAGCTT
GCCCAGGAGCAGGCCCACCAACAGGCTCTCAAGCATGCCAAGCTGCATACACCCCAGCAG
CAGCGAAAGCGAGAGTCTCAGCAGTACCAGCCCAAGCGGGAATCCCAGCAGTACGTGCAG
CAGCATAACATGCAACAGCAGCATGTGCCCAAGACTAAAAAAGCACATGCTCACCCTGCT
CAACCCCGACAGGCTGCCCCTGCTCCTCCCAGTCAGGTGTTGAGCCCCATGTTGAGCCAC
TCCGAATCCGAGGAAGATCTGTCCATGTTCCAGGACGCACACGAGCATCTCGGCAAGAGC
GTTTCCAAGACGGAACTCCATAGGACTGATGTTCAGTCTCCTGTTCCCGTGTCTCTGGTG
AACAAGGACGCTGTCGACCACGTGGAGGCCAAGACCGAACCCGAGACAGGACACGAAATT
GAGCCTCCCATCGTCACCACCATTGGCGATGTACAGGAGGCCCAGGACGAGGCTGCTGCA
TACAATGAGGTTATGGGCGACGTTGAGGAGCCTGTGACTACCAAGGCTGCTGTTCCAGAC
TCCCCTGGCCGATTCGGATCTGGTGTCTTTGGTTCTGTCGCTAACGCTGTTTCTGGCGCC
GTCGCTGCCGCTGATCAGTTTGGCAAGCAGATGCAGTTCAACCCCAGCGAGTCTACTCTC
GAGTCGGTCGACAATGAGGGTGATTCAATCTACGAAGACGAGGAGGAGGTAGTTGAGGAG
AAGCAGCACACTCTGCAGCCTCCCGCTCAGCTGCATGTCAACACCGACGCTGCCAACGCC
TCTTCGGATATGGACGACTTGCCCACCCCCAAGCTGGCCTCTTCGCAGTTCTCCAGCTCG
CCCTCGTCGCCTTCCATGCGACGAAACTACCGACAGTATGCTCTGGGAGGCATGCCCGTG
CCCTCTTCGTCCGACATTGATGCCGTTTCGCCCTCCAACCACAAGTTTTCGCCTTCTTCC
GGTTCCATTGGCTCCAACTACACCTCTACCGGCGCTCCTGGAGCGGGTGCTGGTGTTGGA
GTAACTCCATCGCACATTCCCGACTACTCTGTCGATGTGGAGAGACCACGAGACTCTGTG
TACGCCGACAGCAACTACGGAGACGAGTCGCAATATGGAACCACCGCTTCTCAGTTTGTG
TCTCACGTGAACCCAGAGGAAGAGGAGGAAGAGGAGGAAGATGTGCCTGTTAAGGCATTT
GGAAATCTCAAGACCAGCCCTCGACTTGGTGCTTCCGAGGGCCCCGGATCTGTGCCTGCT
CTGGCCTCTTCTTCTCCCAAGGCTGTAGTGCATCCTCCTACAGGCCCCATGCATGACCCT
GCAGGCGCCTCTTCTGCAGCTCCCGTGCCTGTGGAGTACCCCACCCTCGACCCTGGGTCT
CCCAATGCTCCCCGGCAGCCTTCCCCTGCCAAGAAGGTTGGTTTCGCCGAGGAGGAGGAG
GTTGTGGAGCACGTTCCTCACCCCGAGGGTCCCATGGACGACAATGCTTCGATTGAGTCC
GATTCCTCGTGGCGGCGGGAGCGACGAGCCGGCCGTGGTGGCATCAACTCCACCAACGGC
GGCGTTTCCGACGAGGGATATCGGCTCACTCTGCGAGACGATGCTGGTTACGGGCGGGAT
GTGCCCCAGGAGCCCTACTCTATGCGAGCTCCTCAGTTCCGAAAGCCCAAAGAGGAGTTC
CGAGAGCAATCCCCTGCTCGACAGGTTCCCCAGGAGCCCCAGTACGGCTTTGCTGCCGTT
CGAGAGCAGCAGAACCGCGGTGGCCAGCAGCAGCCTCGTGCTTCCCTGCAGCCCCAGGCT
CGACGGGGATCTGTTCCCACCCAGCCTGCTCTTGTGCGGTCAAATTCTGCATCTTCGTTT
GACCGAGGCTCCCGTTCCAACTCCATGAGTGCGTTCCGAATGGGTTCCATGCGTGAGCCT
CGAACCACGCTGCGTCAGGACGTGCCCCCAGTGCCCGCCATGCCTTCGGGTATGTCTGCT
GGTCCCGCTCATGTATCTCGGTTTTCAGACACGGATTCCGAAGACGAGGGTGCTGGCATC
TTTTCTGGTGCCAACACCTCACCTCGAAAGAAGCGAGGCATGCGATTCTTCTCTTCTTCG
AAGGAGGAAATGCGACCTACCCCTGCCCCTGCCTCTCCCTCGGAGCCTGGTCTTGGAAAG
AAGCTGTTTTCTTCGACCAAGACCCTCAAGAAGCAGCAGGCCGAGGCCCAGGGAGGATAT
GCGCAGTTTACCCAGCAGCCCGGTGCTGTGCCTGAGCCTCAGATGATTGAGAGCACTGCC
ACCGCAGGTTCTGCCGGCAAGCAAAAGAAGTTTGGCAAGCTACGACGGGTGTTTAGATTG
GATTAATGATGAGGGAAGAGGGAGGATTGGATATATGTAAGATAGTAATGAGCATTTTGG
TAATTGACAACTGAAACGAAGGCTGGTCGTAGGCCAGCCCGAGTGTTGCGAGTTCAAACT
GCTGTAGAGAGTATAAGCATGTAATGAATACTTTTTCAGATGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B02002g_CDS-001

Protein length: 1262 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B02002g_CDS-001 MGWGQRTFSFSSYSYTGVGQAHPSQPDVNSMARAAASSVGSNPNERANSGLSSAAAAAAI
RHHSLTSSTSQPNLQQGRNGSMRGGREGRTSSLLGGRTNSLMGGRKSSLRGQNGGFASVS
GTNASGRAPDLIEEESGSVGDLPNVRKGKRGTRTYSLTTPFEGFEDGGIGQGASPAISPN
NSITSVSSPGRTSSLRHSLRGAPSSGSLRRGSMTSTTTNTERTHSLTSTTTTIKRMGSFH
VITTKTQEVPAGGKPPARSRLSQGGTKPAYQTRDLLTQQRQEREARQQQLNKANRAKAQK
EQRLRQQQQVPVVKEPEPPASPIHYASSVLSYESDLNTVSEYPESSLTSPNGSVGSGKRH
MPPPRTLSPMKPALKMSESPRNSFTQDTNSLSPHSSIDSPSRTRKQRVSFSSESESNFIA
QESQRQKALLSLPQQQPAKQPLQPRPKQYSPGTVVPVSNNQLASNGLPKVVKTPERQSQL
AQEQAHQQALKHAKLHTPQQQRKRESQQYQPKRESQQYVQQHNMQQQHVPKTKKAHAHPA
QPRQAAPAPPSQVLSPMLSHSESEEDLSMFQDAHEHLGKSVSKTELHRTDVQSPVPVSLV
NKDAVDHVEAKTEPETGHEIEPPIVTTIGDVQEAQDEAAAYNEVMGDVEEPVTTKAAVPD
SPGRFGSGVFGSVANAVSGAVAAADQFGKQMQFNPSESTLESVDNEGDSIYEDEEEVVEE
KQHTLQPPAQLHVNTDAANASSDMDDLPTPKLASSQFSSSPSSPSMRRNYRQYALGGMPV
PSSSDIDAVSPSNHKFSPSSGSIGSNYTSTGAPGAGAGVGVTPSHIPDYSVDVERPRDSV
YADSNYGDESQYGTTASQFVSHVNPEEEEEEEEDVPVKAFGNLKTSPRLGASEGPGSVPA
LASSSPKAVVHPPTGPMHDPAGASSAAPVPVEYPTLDPGSPNAPRQPSPAKKVGFAEEEE
VVEHVPHPEGPMDDNASIESDSSWRRERRAGRGGINSTNGGVSDEGYRLTLRDDAGYGRD
VPQEPYSMRAPQFRKPKEEFREQSPARQVPQEPQYGFAAVREQQNRGGQQQPRASLQPQA
RRGSVPTQPALVRSNSASSFDRGSRSNSMSAFRMGSMREPRTTLRQDVPPVPAMPSGMSA
GPAHVSRFSDTDSEDEGAGIFSGANTSPRKKRGMRFFSSSKEEMRPTPAPASPSEPGLGK
KLFSSTKTLKKQQAEAQGGYAQFTQQPGAVPEPQMIESTATAGSAGKQKKFGKLRRVFRL
D*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG