YALI0B01980g

Overview

Description some similarities with uniprot|P87250 Kluyveromyces lactis mitochondrial replication protein MTF1
Locus type CDS
Locus tag YALI0B01980g

Location

Species Yarrowia lipolytica Positions 289569..291038
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1470 (nuc.)
Previous locus YALI0B01936r Next locus YALI0B02002g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B01980g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B01980gYALI0B01980g_mRNA-001YALI0B01980g_CDS-001

Nucleotide sequence

 

>YALI0B01980g
ATGTCGGTGACGAAACGACTTGTGCCCTTTACTGGGTTCATCAACTCACGCGCCCGGCAG
GCGTTTTCTGACATTCCGAAAATGGAGGCCATGTTGAAGAGTAGCGGACTCCAAAAGTTT
TACCGCAAAAGTGACAACCTGACCATTGTGGATGCCTATGCTGGATATGGCTGGTTTTCC
ACCGCTCTTTACAACTCTCTGCAGCCTAAAAAGCTGTTTCTCATGGACCCTTCAAACTAC
TCCAAGGAGCCTCTGTCGCATCTCCAGGCTCAAGACCCCGAGGTGATCACCTACAGCAAT
TACGACCCGTTCCAGTGGCGGTCGTACTACCCTGTCTACGAGTCGATTTCCAAGGCGTAC
AACAAGCCCGACCGGACGGAGGTGAGCCGCGACTTTCTGTTTGTGGCCAACCTGGCTTAT
ACGCGAGGAGAGTCGCTATTGTACCAGTACCTTTTGTGCATTTTACATCAGAATTGGCTG
CAGCGGTACGGCCGGGTTCGGATGTTGATTTGGATCTCTTCGGCCTCAGCTGAGAAGTTG
ACCCATGGTTCCCGACGAACAAAACTGCAAGACAAGACGGTAGCTCTCAAGGAGCTGGAT
GAGAGGATTGACAAGTTGAAGGCCAACATTGCCAAGTCGGAACTGTGGTTGAAGCGCCCC
AATCTGTCTGAAAAGTCGGAGAACTCACACAATAAGAAGCTCGACAAGTACAGAAACACT
CTGGAGAAGCTTGAAAAGAAGAGAGCGGAGTCGGTCAGTCTAATTGAAAACCGGAGATTC
AAAAGCACCGTCATTCGTGAAATGACGTGTGATTACCGATACCTGATTGGAGGCAATGCC
AAACATACCAAACGAAGCAAGCCTGTGACGACAGAAGCACATCGACAGGTGCAGATCAAA
AAACGACTGGAAGGACACAAAAAACGCGTGCCCCAAATGACATGCAACCCTTACGATAAA
GATGCACTTGTCTATTACGAAAATGACTACGAGAATATGTTTTGTCCTCAGAAGACAACA
TCTCTCGGAGGTCTGGTTCTTCTGGAACTGACACCTAAGAACGTCAAGCTCGAGAGACTG
GATGAGTGGTTCTTTGTGGTCACTAGGCTGTTTGTGGCCAGCATCCTGCCCATTGGCCGT
ACTCTGGAGACCTTGGGACCGGGAGCTACGGAGTGGATGAGTCCTCACCTGTCGCCCGCC
ATTTTGTCCAGCAAGATCAGCGAGATTTCCATCCCCGACCTGGAACATATCGTCGAGGTT
TTCTGGAGATGGCCCTTCAAGCCTCAGGTGTTGATTGACACCTATGAGGAGCGGATGGTG
AGTACTCCAGATGAGAGCACTTTCGATAACCCGCTTTTCGACATTGATGACGATGTGGAA
GGGGGAGGATCAGATGTTGATGATGATCTCATGTAGATTGATCATCTACAAACTTGTACA
TACTGGCTAATTGATTAATTGCATAAAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B01980g_CDS-001

Protein length: 472 aa.
Product: Conserved hypothetical protein

>YALI0B01980g_CDS-001 MSVTKRLVPFTGFINSRARQAFSDIPKMEAMLKSSGLQKFYRKSDNLTIVDAYAGYGWFS
TALYNSLQPKKLFLMDPSNYSKEPLSHLQAQDPEVITYSNYDPFQWRSYYPVYESISKAY
NKPDRTEVSRDFLFVANLAYTRGESLLYQYLLCILHQNWLQRYGRVRMLIWISSASAEKL
THGSRRTKLQDKTVALKELDERIDKLKANIAKSELWLKRPNLSEKSENSHNKKLDKYRNT
LEKLEKKRAESVSLIENRRFKSTVIREMTCDYRYLIGGNAKHTKRSKPVTTEAHRQVQIK
KRLEGHKKRVPQMTCNPYDKDALVYYENDYENMFCPQKTTSLGGLVLLELTPKNVKLERL
DEWFFVVTRLFVASILPIGRTLETLGPGATEWMSPHLSPAILSSKISEISIPDLEHIVEV
FWRWPFKPQVLIDTYEERMVSTPDESTFDNPLFDIDDDVEGGGSDVDDDLM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG