YALI0B00605t - Ylli_pol

Overview

Description Ylli relics, ENA|AJ319752 Yarrowia lipolytica LINE retrotransposon Ylli
Locus type mobile_element
Gene name Ylli_pol
Locus tag YALI0B00605t
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 61101..61577
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 477 (nuc.)
Previous locus YALI0B00594g Next locus YALI0B00616g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B00605t oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B00605tYALI0B00605t_mRNA-001YALI0B00605t_CDS-001

Nucleotide sequence

 

>YALI0B00605t
AAGCCCAGATGTGTTTCTACGATGGACAACCGCCAGCACTTCACGATGAGCGAGAGTAGA
GACAGTAGCAAGCGTAAAAGGCGGCCGAGGCCACCGAGAGAACAGCGTAGCAGGGCGCGT
AGTCACCACAGGGGACGCAGAACCAAACCAATGACGAAGAAGAACCACAAGGAGACGTTT
TCAAAGGCAATGCAAATGAAGAGGGCAATGGAAGGATTGAGATTAGAGAACTGGAGACTG
GAGTGGCGTTTTCCCGATGAACGAACAAACACGCGAAACTATGTGGACCAACATACAACA
CGGACTGAACCAGGTTTTTTTATGATTTTTTTACTGGAAATAGGTACGTGCCAAGTTGGA
CCATGACACTAAACGTGTTTAATTAGTAATATTCGTGTAAGCGTACATTCATTTCAAAGG
TTAATCTTTCACGGCAAAGTTATAATTAAATGAATGTATATGCAGAAAAAAAAAAAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B00605t_CDS-001

Protein length: 19 aa.
Gene: Ylli_pol

>YALI0B00605t_CDS-001 AQMCFYDGQPPALHDERE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG