YALI0B00594g

Overview

Description some similarities with uniprot|P47029 Saccharomyces cerevisiae YJL084C ALY2 (ohnolog of YKR021W) Protein proposed to regulate the endocytosis of plasma membrane proteins
Locus type CDS
Locus tag YALI0B00594g

Location

Species Yarrowia lipolytica Positions 57091..59611
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 2521 (nuc.)
Previous locus YALI0B00572g Next locus YALI0B00605t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B00594g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B00594gYALI0B00594g_mRNA-001YALI0B00594g_CDS-001

Nucleotide sequence

 

>YALI0B00594g
ATGCCTTCAAGCCTGAAAACCCCCCACACCACCACCATGGTGGAAAACTCGCCGCTGTTT
CCGGCCCACTTTTCGCACGAGGCCAAAGACATCTCGTCGAGCGGCTCGGTGGCCATCGGC
ATCGTACTGGCGGAAAAAAACCTGTTTGTGCACGGGTTTGACCACCACGAGCAGGAGCAG
CAGCCACCGGCGCTGCTGCGAGGCAGTCTCATTGTTAAGGTGGCCAAGTCGACGAAAATC
AAAAGCATCAACCTGTCGTTCCGTGGCATTGCCCGCACGGAGTGGCCCGAGGGCATTCCG
CCGAAAAAAGTCGACACGTTTGAGCAGAAAGACCTGCATAGCCACGTGTGGCCATTTTTC
AACTCCTCCTTCCCCATGGCAGAGTTCTCTTCCGGCGCACACATTGTGCGGTCCAACCAT
CTCCACGACCACCCGCTGACTCGAACCAACACCCATGGCAGCACCACCAGTCTGCACGAG
CTCGACGAGTCTCATGACGAAGACGACCATCACGAGACCCATATCATCAAGGGGTTGGCC
AACAAGCTGCGGCGGGCGGCGTCGCCCAGTCCCGTTTTCCGGTCGCGGAGCAAATCGCCT
TCCCGGGCTTCCAAGGAAATGTCACGTGCGAAAACGGACTCGGTCGATCTTCCGCGGACC
AACACCTCCAGCTCCACGGCGTCCACCACCTCGGAGCCCACCGAAAAGGACGTCCATACA
AAGGGGTATCGTCTGTTCCCTCCGGGAGAGTACGTGTACAATTTTGAGCTCCCCATTCAG
GCCAGTTTACCCGAGACGATTTCGGCGGCGTTTGGGTCGGTGTCGTATACGCTGGAGGCG
TCGATCGAGCGTCCCGGCGCGTTCCGGTCGAATCTGGTGGGCAAAAAGGAGGTTCGGTTG
ATCCGTGCGCCGGCAGACCAATCGCAGGAGGTTACGGAGCCGATTGTCATTTCGCGGCAT
TGGGAAGACCAGTTGCATTATGACATTGTTATTGGTGGCAAGAGCATTCCCATCGGCACG
AAAATGCAGGTGGCATTCAAACTGACGCCGTTAGCCAAGGTCCGGTGCCATCGGATCCGA
ATCTACATCTCCGAAAACATTGACTACTACTGTCGCAAGATGAAGATTCATCGGGTCGAG
CCGGCGCGAAAGTACCTGGTGTTTGAACACAAGCCCGACGGCGGCATCCAGGACTCGTTG
TTGCCGAATCTCGACGGCGTCCAGGAGTTGATGGCTGGAGGAGCCACCGAGCTGGAGTTT
GACGTGGTGATTCCTGAAAAGGTTGGTCGGGACAAGAAGGAGCGACTGCATCCCAACACG
TCGTTCAAAAACATCAAGGTCCATCATTGGATCAAGGTAGTGATGCGACTGAGTAAAATA
GACCCGGATAACCCTGAAAAACGCAAGCATTTCGAAATCTCCATCGATTCGCCGTTCCAT
CTGCTCGACTCGCGATGCACCGGTGCCAACGTCTCTCTTCCCGCCTACCCGGCCGGACGA
AGACCCAGCCGGCCCATTTCCGTGGTTGCCAGTGATGCTCCTCGACCCATTCACTTTATC
CGACAGCCGTCGATTGCACCACCGCCGTTTGACGCTGATGAAGCGCCTCCTCAGCTGGCA
GAACCGCCATCTTACGACACCGCCGACGGAGGAACGTACCAGGAGCGATTCAGCCAGTAC
CAGCGGTCACGTGGGCGCCAAGCATCGACGGTGAGTCTGACTCCGTCGCAGGCGCCGTCA
ATGGACCTTTCGCAGTCCCGTGACTTTAGCAATTCTGGGTTTGGTGGCTCGTCGGCTTCT
TCGATCGCCAATCCTCGTGAGTCGTCGGCGGCTCTTCTTCGTCGGGCCTCGCAGACCTCC
GTCAATGTCTTGGCCACGACTCCGCCGGCAGTCTCCCATATGGGGCGTCATGCATCGGTG
GCGTCGTCGTCCTCCTCCGTCGATATCACTAATCAAGGAGGGGGTCCAGGAGGGTCAGGG
GCAGGAGGTGGCATGTTCAGAAACTACGATATGGGTCGAGCAGCAGTGAGAGAGGCTCCA
GAACATGATGATGACCATGATGACGAGTCACAAGACCCCGACGATCCGTTGGCCGCGGCT
CCGGTGTCACGTGATGCCGACCAGCCTGTGCCTGGGCCTTCGGCCACTTCTCGGCTCGCT
ACTCATGCCAATGACGTGACGCCTCTGGATTCCGACAGCGACACTGCGTCGCATCTCACC
GCCTCGCCGTCTTCGACCTCGTTAGCGTCGTCGTACTACCAGCGACGACTAGAGACCGGC
TCCATTTGCTCTGATCGGCTCCTGGACGACGATGGAGTGGAGGACAATGTCCACGATTTG
GCCGCGAGTGCCAGTCGGTTGTCATTGGGGGAGTTTTGACATGATAGATGATAAACTATG
CATTTTGTTGATTGAATAGATCGTTTTGGATTCGACAGGGTCCCTGAACGAGATATTCCG
GTGGATATTTGGCGTATTAGATATGGAACAGTGATATTTTGTAATGATAGTGTCGGCTTT
A

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B00594g_CDS-001

Protein length: 793 aa.
Product: Conserved hypothetical protein

>YALI0B00594g_CDS-001 MPSSLKTPHTTTMVENSPLFPAHFSHEAKDISSSGSVAIGIVLAEKNLFVHGFDHHEQEQ
QPPALLRGSLIVKVAKSTKIKSINLSFRGIARTEWPEGIPPKKVDTFEQKDLHSHVWPFF
NSSFPMAEFSSGAHIVRSNHLHDHPLTRTNTHGSTTSLHELDESHDEDDHHETHIIKGLA
NKLRRAASPSPVFRSRSKSPSRASKEMSRAKTDSVDLPRTNTSSSTASTTSEPTEKDVHT
KGYRLFPPGEYVYNFELPIQASLPETISAAFGSVSYTLEASIERPGAFRSNLVGKKEVRL
IRAPADQSQEVTEPIVISRHWEDQLHYDIVIGGKSIPIGTKMQVAFKLTPLAKVRCHRIR
IYISENIDYYCRKMKIHRVEPARKYLVFEHKPDGGIQDSLLPNLDGVQELMAGGATELEF
DVVIPEKVGRDKKERLHPNTSFKNIKVHHWIKVVMRLSKIDPDNPEKRKHFEISIDSPFH
LLDSRCTGANVSLPAYPAGRRPSRPISVVASDAPRPIHFIRQPSIAPPPFDADEAPPQLA
EPPSYDTADGGTYQERFSQYQRSRGRQASTVSLTPSQAPSMDLSQSRDFSNSGFGGSSAS
SIANPRESSAALLRRASQTSVNVLATTPPAVSHMGRHASVASSSSSVDITNQGGGPGGSG
AGGGMFRNYDMGRAAVREAPEHDDDHDDESQDPDDPLAAAPVSRDADQPVPGPSATSRLA
THANDVTPLDSDSDTASHLTASPSSTSLASSYYQRRLETGSICSDRLLDDDGVEDNVHDL
AASASRLSLGEF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG