YALI0B00286g

Overview

Description weakly similar to uniprot|P40085 Saccharomyces cerevisiae YER140w
Locus type CDS
Locus tag YALI0B00286g

Location

Species Yarrowia lipolytica Positions 21440..23301
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1862 (nuc.)
Previous locus YALI0B00264g Next locus YALI0B00308g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B00286g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B00286gYALI0B00286g_mRNA-001YALI0B00286g_CDS-001

Nucleotide sequence

 

>YALI0B00286g
ATGCGAAGGCGAACCAACACGTCGGCGAAAAGCGACCGAATACGTCCGCGGCGGTCTCTG
TCGTCTCCGTCGCGTCCGCGGCTGTCGTTTTCAGACTTTGAGGGGTTTGAACGGCCCGAA
AACCCGCCGGTTCCACGCTCATTATGGGACTATCTCCAGGTGCACCTCCAGGGCGAACAG
CCGTACACCGAGGAGAAAAATGAGCACCTGCTGTCGCTTATCAAGGTGCCGCTGAATCTG
GAGATGATCATGGCCTTTGGATTTCTCACTTGCCTCGACTCCTTCCTCTACACGGTCACA
ATCATGCCTCTCAAGGTGGCCTCAGTACTATGGGGCATAGCCAAACGTCGGTCGACCCGC
CACGTGACCATGACCAACATGAGCGACATCATCAAGGCTGTGGTTGTCATTTCGACAATG
ACCTTCCTGCTGCTCATTGACACCTCCAAGCTCTACCACAACATCAGAGGCCAGAACGCC
ATGAAGCTCTACGTCATGTTCAACGTGCTGGAAATCACAGACAAACTGTGTGCGGCTTGG
GGTCTGGATGTGCTGGAGTCGCTCTTTTCCGCAGGCACCCTCAACAACTACCAGCGACTC
GCGACATACATGGGTCTGTACATGGCTTACTCGGCTGTGCATTCAGGGGTGCTGCTGTAC
CAGATTGTGACCCTCAACGTGGCCGTCAACTCGTACTCCAACGCGCTGCTGACCCTGCTG
TTGTCCAACCAGTTCAACGAGGTCAAGTCGACCGTTTTTAAGCGGTTTGAACGCGAGTCT
CTGTTCCAGCTCACCTGTGCAGATATCACCGAGCGGTTCCAGTTGTGGGTGCTACTGGTG
TCCATCGGACTCCGGAACGTGGTCGAGGTCTCCAATACGGGTCTCGTTCCATCGTCGTGG
TCGGGCTGGAATCGATGGCTAGGGGCTCTGCTGGGTCCTGCTCTAGTGGTGCTGGGCTCC
GAAGTCGCTGTCGACTGGCTCAAGCACTCGTACATTGCGAAATTCAACAATTTCCGTCCC
AGAGTGTACCGCAAGTTTCTGGACGTGCTCACTCAGGACTATCACGAGCATGCATTCAAT
GACCAGCTCATTACTCGACGAATGGGCCTTCCTACCACGGCTCTGGCGTGCGTCTTCATG
CGCATGTGCTACCAGAGCTACCAGATTCTTTTCGAGTCTGGAGAGTCGCGTTTTGTCAAG
GGAACGCCTACAGTCAGTCCCCAACTGAGAGAGACATTGGCACAGGTGGACACAAAGTTC
GTCAACAACGTGTCCGTTTCTGAGATTGCCCAGGCCACAAGGACGTTTTTCAGCTCGTTG
TACAACGGCACATCGCCTCTGGTGTCGTTTTCTTCCAACATTATCCCTGTGTGGGCGAAA
TTCGACATTTACTATGTGACGTATCTGCTGACGATGATTCTGGTGTTTGCGCTTGTGTTT
GCCGTACTGGTCATCTTCAAGTTGTTTCTGGGCCTCACCTTGTTGAGGTACAGTCACAGC
AAGAGAAGACGACAGAAGCGAACGTTTGACGAGATGGAAAAGAAGAGATCTGAGTCAATC
AAGGACGATTATCTGCCTGGAAAGACGAGGGGGGGACAGGGCGTGATTGAGCTGACGGAC
GATATGCAGCAGGGTCTGTACAGCGACGGGGAGGAAAAGAAGGAGAAGCAGCACAAGAAG
AAGGTGGTGGAGCTGCAGAATGTCAGCAGGTTTGATATGGTGAGCAAGAGGATTTGGTAG
CCGAGTGCGGCGAGTGTTCCAATGAAGCGTAGCCTTGGCTACCCGGGGCACCATTCCTCC
ACTAGCTCGCATACCTCCCATATTTATTTATTTTATGAGCATTTTTAATGATTGGTCATG
TG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B00286g_CDS-001

Protein length: 580 aa.
Product: Conserved hypothetical protein

>YALI0B00286g_CDS-001 MRRRTNTSAKSDRIRPRRSLSSPSRPRLSFSDFEGFERPENPPVPRSLWDYLQVHLQGEQ
PYTEEKNEHLLSLIKVPLNLEMIMAFGFLTCLDSFLYTVTIMPLKVASVLWGIAKRRSTR
HVTMTNMSDIIKAVVVISTMTFLLLIDTSKLYHNIRGQNAMKLYVMFNVLEITDKLCAAW
GLDVLESLFSAGTLNNYQRLATYMGLYMAYSAVHSGVLLYQIVTLNVAVNSYSNALLTLL
LSNQFNEVKSTVFKRFERESLFQLTCADITERFQLWVLLVSIGLRNVVEVSNTGLVPSSW
SGWNRWLGALLGPALVVLGSEVAVDWLKHSYIAKFNNFRPRVYRKFLDVLTQDYHEHAFN
DQLITRRMGLPTTALACVFMRMCYQSYQILFESGESRFVKGTPTVSPQLRETLAQVDTKF
VNNVSVSEIAQATRTFFSSLYNGTSPLVSFSSNIIPVWAKFDIYYVTYLLTMILVFALVF
AVLVIFKLFLGLTLLRYSHSKRRRQKRTFDEMEKKRSESIKDDYLPGKTRGGQGVIELTD
DMQQGLYSDGEEKKEKQHKKKVVELQNVSRFDMVSKRIW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG