YALI0B00308g

Overview

Description weakly similar to uniprot|P40084 Saccharomyces cerevisiae YER139C (ohnolog of YDR066C) RTR1 CTD phosphatase
Locus type CDS
Locus tag YALI0B00308g

Location

Species Yarrowia lipolytica Positions 23954..25188
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1235 (nuc.)
Previous locus YALI0B00286g Next locus YALI0B00330r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B00308g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B00308gYALI0B00308g_mRNA-001YALI0B00308g_CDS-001

Nucleotide sequence

 

>YALI0B00308g
ATGTTGCAACTACGCGAGGAAATCGAAAAGCTACGAACTCGGTTTGGAAACACGGGGTCT
GAGCCGCCAAACCTGCAGCTTTCTGCACTCATCACGATCGCCGTGATCGAGGCTCTGTCG
GCGAAGAAAACCGACATCCAGACCTTCAAGTACGCGTCGCGATACCTCACCCCCGAGGTG
TACGACGAGCTGGTTGGCGAACGCACTTACGAACACATCTGCGGGTACCCTCCGTGCGGA
CTGGTGCCCAAGTCTGCGTCGGGCAAAAACAAGATTCTCGGCACGCTGGCCCAGAACCAA
AAGTTTGACGTGCCGTGGGCGTATCTGCGGACCTTTTGCAGCAAGCAGCACTACCAGGCG
AGCCAGTTTTATCGTGCACAGCTGTCGTCGGACCCTCTGGACCTGCGAGGCAGCATCTGG
GGCGACTATGGCTCGTGCAAACAGTACGAGGGCAGCATCATCCTGCTGGAGGAACTGACG
TCGGACGCCCAGCAGGGCAAATCCATGGCTGAGATTGTGGAGGGGTTCACGCAGATGTCG
CTCAAGGACCCCGAGCTCGCTAGGATGAACATTCCTGCCAACGGAGACGAGATCACCAAG
CTGGGCAAGGAGATCCAGGAGATTTCGCTGAGAGAGCGCGAGGACGACGAGAATGACGTG
GAGCCAGACTACGAGTCGTTGGAGGACATGAGTAGTAAGGATAAGGCCAGTGCTATTGAG
GGCTATAAGCCGAGAATCCAGTGGAGATAGCGAGACGGATTGAGGAATCTATCATGACAG
GTTGAGGCAACGTCGACATCAAGTTGTGGATTCCTGACGATAACATGAGACGGGAATCGC
AACAAGATCTGAAACAGTGACAGCTGGGTTTTAGACTGGATTCGGCAACACTGACAGGTG
CACCACATGTTCGACTAGAACGCCCAGCTCCACATAGCGGCTTAGACATACGCCACAGCA
GGAGACAGTGGAACATTGCCCACCACTGTCACACTCTCCGAGGTGGTATAATTTCTAGTG
TCTGAATGGGTGACTCTCTGGAGTTAGGTCTCCTCTCTATCTTGCGCTGTGATCTCCCAG
AGTATCATCTTCTGATCTGTCAGGCTTCCAATACCGTCTCCATGAACAGGCGAGTGGTCT
CATTTGCAAAGTGCAGGAATTCGGCCTCCACGCTCGTCTCCTATTTATATGGCTACTAGC
TGATATGGAACAAATGTATATTACGATGAGGTATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B00308g_CDS-001

Protein length: 250 aa.
Product: Conserved hypothetical protein

>YALI0B00308g_CDS-001 MLQLREEIEKLRTRFGNTGSEPPNLQLSALITIAVIEALSAKKTDIQTFKYASRYLTPEV
YDELVGERTYEHICGYPPCGLVPKSASGKNKILGTLAQNQKFDVPWAYLRTFCSKQHYQA
SQFYRAQLSSDPLDLRGSIWGDYGSCKQYEGSIILLEELTSDAQQGKSMAEIVEGFTQMS
LKDPELARMNIPANGDEITKLGKEIQEISLREREDDENDVEPDYESLEDMSSKDKASAIE
GYKPRIQWR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG