YALI0F32043g

Overview

Description weakly similar to uniprot|P39960 Saccharomyces cerevisiae YER155c BEM2 GTPase-activating protein
Locus type CDS
Locus tag YALI0F32043g

Location

Species Yarrowia lipolytica Positions 3967025..3973667
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 6643 (nuc.)
Previous locus YALI0F32021g Next locus YALI0F32060g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F32043g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F32043gYALI0F32043g_mRNA-001YALI0F32043g_CDS-001

Nucleotide sequence

 

>YALI0F32043g
ATGGGATGGGGAAAGAAATCGTCGTCATCGGCGGTCCCTAAGCCGCCTGCACAACCGCCC
AAATCACCAGCCAAACCGCCGTCTTCTTCAGCATCGCAGCCTAGCTCCCGTGATCCGGCC
ATAGTTCCACGCGCAGACTGCAAGAAGAACTATTACTACCAGCAGATGTTGCATCGCCAG
CTGAATGATGATGGTAGCACCGACAACCTGGCCACGCGCAACAGCTTTTCGTCGTCCGAG
AACAAGACAATCCGAGAAGACATTCGCATGGGAGATCAGGAGGTGCTGCGTGACATCCGC
GAGCTCAAGAGCGCTGGAAGCAACGTCCGCAGATCGCGATCGCCCCAGTTGCGGCCGCCT
AGCGTCCACCAACGGCTTCCCTCGGACGATTCCATGTCCAATTCGAGTGAGTACAGTTAT
CGCGACACAAGACCCACACTAATGACAAGCTAACACAGCCGACTACTATGTGGAACCTCT
AAACAGGTGAGTGGATTCACAAGCGCAGCGCAAGGACGTATTCGTTACGTCACTAGAGGA
CCAGGTGCATAGCCCGATGGCGGCCAGTCTCAGACCTAATTTCCGCAGTTTTCCGATCCA
CTGAAATATTCTGGTCCACAAATATTTGTCCGAATATTTAGACCGGAACAAGGCGCGTTT
TTTGTGTTTCTGGTTCGGTACCACGCTACTGTTGGTGCGCACATTGCAATGTACTCTCAC
GAGCTACCTATGCTGTAGTCTCCTTTTTTAGCGCCCCCCCCCACTAACCCAGTCCTCTGC
CTTCCATATCCACGTCAGACACGTCTCTGACAGCTTCCACGGCATTTTCCCGTGACCGTG
AGTATAACAACGTTGCTACAGCAAGGGCCTCAACTATTACGCTCGTACACCCCTGACGAT
ACAGACGCTCGATGAGAGAGATGTTACTACGCTATTTGAGTTTAAGGGGTAAGCGATTTG
GGCTTCCATTTGGACTCTGATTTGGAACTCCCGATCCTGATTCTTAGCTCTTAGCTCTTG
TGACGTGTGAGGGAAAAAAAAAGCAACGACACCGTTTTTTTGCTTCTCGTACATCTGCCC
CTGCAATGTCCACTTGTGGCACCCCTCGCTGTCTCTCCAACCGTCGCGTATAATATCGAG
CTCAGTTATCGAGGCTACTAAGCAGCCTTCGTTAACCCCTTGAAGATCCTAACCCAATAG
ACCCGTCAGTGGTGAACTCAAAAGCTGCGGTGGCCAGTGTGAAATCCGCTAAATCGGATA
TCAGCATGAGAAGTACATCGAAATCCGTGGAGCGAAATCCATTCACCGGAGTGATTACTA
CCAAGTGAGTATGAGTGGAGGAAGTGGTTAACGAATGGCCCTGGGAACGGTCAGTGCTAT
GTGTGGTGTTCTCCTTTTACCCCTGGTTTACGATGCACGGTCCTTTTATGAGAAAACGCG
TTAAGCTTTCGCCAGCCGTCTCACAATCTGCAGTCCCAAGAAAGACGACACATGAGTCTC
GCGAAAGCGCACGACACGACACCATACACAAAAACAACCACACACACACACAAAAAGTCC
ACACCAGACAAGCACACAGACACCACAACATAAACCACACAAATCAGCCTGCTAACTCCA
GACACGACAGTATGTATCCTCACACTGCCCCAAACGATGGGATGAAAAAGACAGCTCCAG
CTAACACAGTGGAACACGAAGGTTGGCTCAACAACTCGCTAACGCCAGGCGCACAATGGC
GCTTGTCCCGAGGAGTGGTAAGAAATGGTCAACTGCTGGTATACAAGCCGCCGTCCGATC
TATCCAACCGATTCCTCGACCCCGACGCCCCCCGAACACAACCCTCGTCGACACACACTG
CCATTTCAGCACCGTTCAACGCCGCTCCAGTGTCCGATGGCATGCTGTCGCATGCCTCAG
CTGAGCCTCATCCGTCACTCGAACTCGATTCCAGCGGCACTCGCATCATGGGAGGCACTG
TGGAAGCTGTGTGCCACCAGCTTCTGTTTGGAGACGACGATCTGCTCGCGGAATCGATAG
TCTACGTGCTGCCCCTATTCACAGATGTGGTTTATGCACTGGACAAGATGTGCGAGTACA
TAATTGGACCCGTCAGAGACAGCCGCTCGAGCTTGGCACGCTACCAAGAACGAGCCGTGG
CCCGAGCTGCCATGGCTGTGCGAAAGATCCAAGACGACTTTTCAGGCATGCTGCTGGAAA
CATCCATCTGCTCGGCTTTGCTTAAACTCATTGACGGTATTGGTGCTCTGTCGGACCAGG
TGAGCACCGATCTCAAGGTCAGCGTCTTCAAAAAACAGCGCCACATGGGCGATCTGCTTA
CCCCCAGTCGAGAGGGTACTCTGTGGTCAGTACAACCAAAACTACCAGAATCCGTCAACG
AGCGGCTGCAATCATTTCTGGTGTTCACCGAGCAACAGAACCAGCTTGGTGCTATGCAAT
CGTCGTCTGCGTCGTCGTCGTCATCGCACTCTTCACAATTCGGCTCGTCGTCGAGCCCCC
AGACGTTCCCACCCGACCTCTTCCTCGACACTAGCATTGATCTTCTCGCATCGCAGGTCT
ACTACTTTCACCTGCAGTTTTCAGGCGCATGGTCGCCTGCGTCAGACATGTCGCTGCTGT
TTGGTGGTCGATGGAACTACTGGCGCCACAATCCGCTCATCTTCGACTCTCTGTCGGTCC
ACTTTTTAGGAGGAGTTCTGCTGGAGCACCTGTTTTCTGGCTCTGGCGCGGTGTCATCTG
CCTACAGAGGCAAGCTACTCTCGCATTGGATCTCGCTTGGAAACGCCCTCAAGAACTGTG
GCGACATGGTTGGCTGGCTAGGCATTGCGGGAGTTGTCTGCTCACCACCTGTACTGCGTC
TACGAGACTCATGGGGCTTTGTGTCCACGGAAATCAAGGATTCTGTTACCAAGGAATGGG
CCCCCGTGGTGTTTGACTTAGAGCGGCGTCTCAGAGTCACCGACATGTCGCGAAAGTCTA
CATATCACGTGCTTGCGCCCCAGGGCATTGGCCAGAGCTACCCCAAGGAGCGGGTGGTCC
CATTTTTCGGCGACCTGTGTGTCCGATACGAAGATGGATCATCCTTCCGTCAGTGCGAGT
CGCGTCTGAACCGTATCCGTACTGCATTTGAGCGGTGGCAGACGTACCTGGATCAGGTAC
CTCAGATCGACACCTTTGACTCTGCCGCCGAGCCCATCTCCGCACTCCAACGAATGCTGT
ACTACCTGTTGAACCGCCATTCACAGGGAAACATTCCCTTCCACGTGTCCAACAAGGAGC
CCATCTCTGCGCTGCTGAAAATGTCGCTGCAGTGCGAACCGTCGTCCAGTGGGCGATACC
TGCCCCACTTTTATAATCAGCAGCTTCCTCTGCTGATGGGCAGTTTTGTACCCACCGTGT
TCACAGACGTGACTCCGTCGTATCGGCTCTTTTCCAAGACCGATCTGCTCACTTTTGCAG
GATTTGGCTCCCCAACCAAGAGAAGTGGCACTGGCATTTCGTCACCTCTTCGGTCTCTGC
CTTCTGGTACTTCTGGCACTGAGGTGGATCAGTTTGCCCGGCGGTATGTGAGCCAGTTCA
GTACGCAGCATCCTCTGATTTGTTCCTTGCGAGACATCATGAATGTGGGCTCTAGCATGA
TCCAGGGCGATGACGTACTTCTCAAGGTGGTTTCTGAGGGCCCTGAGGGCTCAGATCCTA
CTGTCGTTGTCAAAGCTGCTTCTTTGGACCGGCTTATTGACATTCTGATCCTTGGTGTGG
GACATTTTGCTCCTCGGGTCAAGATGGACATGGATCTATACACACTGACGTTTTTCGCGA
CATTCCGGTCCTTCTGCTCGCCCACCCAGTTGCTGGACGCGTTTCGACGACGGTTTGTGG
GCGCCCAGTCTGGCTCCACGTCTCTTACAATGCCTAGAACTTTTGATCAAAAGTTCCCCG
ACTGGGATTCCACTCACATCCCCGAGAAGCAGCCCGACTACAGACTGATGGCCCAGATAC
AGATTGGCATTCTTGAGGCCTGCTTCCTGTGGGTGTCGCAGTACTTTATCGACTTTGTCA
ATGAGTACGCTGTCAGAGAGCTCTTTCTGGACTTTTTGGCCACTCTGGAGGTTGAGATCT
CTCGATGGGGAAGTGTTGTGTTCAACAGTGAAGACATTGTTCTCTACCGAGAGTCTCTCG
AGGGTCTGCACAAGAAGCTGCGAAAATTGTTCATCAAGAAGAGCTATCGGCCCGTGTCTG
CCCCTCCCAAGATCCCTTACTTTGGTCCTTCATCCAAATACATCCAGATGCCCATCAATT
GCGGTATCAGCGATGTTGAGTCTTGGATTTCTGAGGTGGATCTGATGGCTGCCCACATCT
TTGCTCTGGTGCCTCTGAAGGACTGGATGTCTCTATACGAGACTCTGGAGGTACAGGGCG
TGGAGCCATTGGGCTTCTTTGCATTCCGAACGCCCTCTATGGCCACCGAAGACGAGGTTA
TTGTGCAGAGCGTCTACACCTACTTTGAGACGCTTTTCCGTGACAAGCCCGAGGACCGGG
TGCTTTTGAACCTCCCCTTTGCAGTACAGGAACTGTTGCGACTCCACAACAACTTTGTTA
GCTACCTGACTGCCCAGTTGACGGACCTGTCCATTAGACCCGAAATTCGAGTGGCTCGAA
TGGAGACGTTGCTCAAGGGCATTGGCATTTGTCGTCGACGAATGAAGGCTGCTCGGGTGT
TTGAAATGTCGCCCATGGCCGATCCCGAAGAGGGACCCCCTCCTCTGTCTCCCTCGGTTG
CTCCTGCCATCCCCTCCTTTGTGGAGGTTGCTTTGGCGGCTGCAGCCATCCGACCCGAGT
CCCGGCTCTTCACCGGCTCGTGGTTTGCTGCTGCCAAGGAGTGTGGTTCATCCACTGCCG
ACTCTCTGGAGTCCATCATACCGTACGTGGATGGCCAGCTCCAGAACAAGCCTCTGACTC
CCTGTGTAGGCTGGCTGATTGAGCGAATGTTGGAGGCGTCGTGTCACGTGCCCAACATGT
GTGTGGAAACTCCCAAGCTCATCAACTTTGACAAGCGGCGGTACGCCTACAATCTGGTGG
GGAATGTGTGCGACATTAGACCCCTAGATGAACAGCAGGACATGAACTTGCCCGAACAGA
CCAAGCGAATGAGCTTTTTGATCAACCTGTCCAAGGCTTCGTTTGCAATTGACCGTAAGG
TGACCAAGGAGCATGCCGCCCGCGAAGCCAAGGCCTATGGCAAGTCTAAGAACCGGGTTT
TTACCCACTGTGTGGGTGCTGAGCTGGAGAAGATCAAGCGAGATGTTCGACAGCGAGAGG
TTCTCGATCGAAAGCGCCAACACGCCGTTCGAGCGCCCACCTCGTCTTCCAACTCGGAAA
AGCGAGGCAAGTCGCGTCTGGGAGGCTTTCTCAAGGCTGTGCGACCCATATCCATGGCTC
TGGGCTCGTCTTGGACTCCTCCGCAATCCCAGGAGGCATCTGGAATCAATCCCCTGGATC
TCCCCACCTTTTCGGTGGACAAGGTCAAGCCGTTCAGATCCATTCCTCTCGGTCACTCCG
ACATTTTCCCTGTGCATGCGCTGTCCAAGTCCATGTTCAAGATTGTGGACTCTTCGGGCG
AGTACTCGTTCCAGGCTGCGTCTGAGGCCGACAGCGAGATTTGGCTCAAGGCGCTCACTC
GGGCCAAGAACAGTGCTCCTCAGACGAGCCAGTCCACTCGACAGATGGGTCGGGTGTTTG
GCGTGCCCGTTGCTGTTGTCTGCGAACGAGAGCAGGCTGCTATTCCTTACATTTGTGAGG
TGTTACTTAACGAGATTGAGGCTCGAGGTCTGGACGAGGTTGGTCTGTATCGAATTTCCG
GTTCTCTCAACAACGTCAATGCTCTCAAACAGGCCTTTGACAATGGTGAGCGTCCCGATA
TGAACGACGACCGATGGTATGATGTCAACACTCTGGCAGGCTGCTTTAAGCTGTATCTGC
GAGAGATGCCCGAGCCGCTGCTTCCTCTGGAGCTGCTCCCTGACTTTGTGTCTTCCACCA
CAGGTCCACAGCCTGACCTGGCTGGCCTTCGAGCTGCTGCCGATCGAATGCCGGCACCCA
ACCTCAATTTGCTGCGACGTCTGGTGCAACATCTGTCTCTGGTGACCACGCACGGCGAGC
AGAACCGAATGCATGCGGTAAACCTGGCCATTGTGTTCTCCATGTCCCTGTTGCCGCCCA
ATGCCTCGGCCAATGTTTCTACGGATCTCAGCAGTATGCAGACGGTTCTCAAGCTGCTCA
TTATCCACTGCGATGGAGTGTTTGGCAGCCTGGATGGAGGATCTACTACGGTTGTCGATG
GTGCATCGACACCATCGTCTGGCCAGCTGGAGGCCCCCGACATGGCTTCGCTGACTCTGT
CCGAGTCCAAGTCGACTTCAACGGTGGACTCTCTAGAGATGATGCAGGCGCCCACTTCTC
GTCGACGACAGCCTGCGGGCCAAAACCCTAACAGACGATTTTCCGTGCTCAATGAGGGCA
CCAACTTTTCTGACCTGGCTCATCAGTTTGGGTCTCAGGAGAGTTTGCATTAAAAATATA
CACGTGTAGACACTAATGAATGATTTATTGATACAGATTTGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F32043g_CDS-001

Protein length: 1845 aa.
Product: Conserved hypothetical protein

>YALI0F32043g_CDS-001 MGWGKKSSSSAVPKPPAQPPKSPAKPPSSSASQPSSRDPAIVPRADCKKNYYYQQMLHRQ
LNDDGSTDNLATRNSFSSSENKTIREDIRMGDQEVLRDIRELKSAGSNVRRSRSPQLRPP
SVHQRLPSDDSMSNSTDYYVEPLNSPLPSISTSDTSLTASTAFSRDHPSVVNSKAAVASV
KSAKSDISMRSTSKSVERNPFTGVITTKHDMEHEGWLNNSLTPGAQWRLSRGVVRNGQLL
VYKPPSDLSNRFLDPDAPRTQPSSTHTAISAPFNAAPVSDGMLSHASAEPHPSLELDSSG
TRIMGGTVEAVCHQLLFGDDDLLAESIVYVLPLFTDVVYALDKMCEYIIGPVRDSRSSLA
RYQERAVARAAMAVRKIQDDFSGMLLETSICSALLKLIDGIGALSDQVSTDLKVSVFKKQ
RHMGDLLTPSREGTLWSVQPKLPESVNERLQSFLVFTEQQNQLGAMQSSSASSSSSHSSQ
FGSSSSPQTFPPDLFLDTSIDLLASQVYYFHLQFSGAWSPASDMSLLFGGRWNYWRHNPL
IFDSLSVHFLGGVLLEHLFSGSGAVSSAYRGKLLSHWISLGNALKNCGDMVGWLGIAGVV
CSPPVLRLRDSWGFVSTEIKDSVTKEWAPVVFDLERRLRVTDMSRKSTYHVLAPQGIGQS
YPKERVVPFFGDLCVRYEDGSSFRQCESRLNRIRTAFERWQTYLDQVPQIDTFDSAAEPI
SALQRMLYYLLNRHSQGNIPFHVSNKEPISALLKMSLQCEPSSSGRYLPHFYNQQLPLLM
GSFVPTVFTDVTPSYRLFSKTDLLTFAGFGSPTKRSGTGISSPLRSLPSGTSGTEVDQFA
RRYVSQFSTQHPLICSLRDIMNVGSSMIQGDDVLLKVVSEGPEGSDPTVVVKAASLDRLI
DILILGVGHFAPRVKMDMDLYTLTFFATFRSFCSPTQLLDAFRRRFVGAQSGSTSLTMPR
TFDQKFPDWDSTHIPEKQPDYRLMAQIQIGILEACFLWVSQYFIDFVNEYAVRELFLDFL
ATLEVEISRWGSVVFNSEDIVLYRESLEGLHKKLRKLFIKKSYRPVSAPPKIPYFGPSSK
YIQMPINCGISDVESWISEVDLMAAHIFALVPLKDWMSLYETLEVQGVEPLGFFAFRTPS
MATEDEVIVQSVYTYFETLFRDKPEDRVLLNLPFAVQELLRLHNNFVSYLTAQLTDLSIR
PEIRVARMETLLKGIGICRRRMKAARVFEMSPMADPEEGPPPLSPSVAPAIPSFVEVALA
AAAIRPESRLFTGSWFAAAKECGSSTADSLESIIPYVDGQLQNKPLTPCVGWLIERMLEA
SCHVPNMCVETPKLINFDKRRYAYNLVGNVCDIRPLDEQQDMNLPEQTKRMSFLINLSKA
SFAIDRKVTKEHAAREAKAYGKSKNRVFTHCVGAELEKIKRDVRQREVLDRKRQHAVRAP
TSSSNSEKRGKSRLGGFLKAVRPISMALGSSWTPPQSQEASGINPLDLPTFSVDKVKPFR
SIPLGHSDIFPVHALSKSMFKIVDSSGEYSFQAASEADSEIWLKALTRAKNSAPQTSQST
RQMGRVFGVPVAVVCEREQAAIPYICEVLLNEIEARGLDEVGLYRISGSLNNVNALKQAF
DNGERPDMNDDRWYDVNTLAGCFKLYLREMPEPLLPLELLPDFVSSTTGPQPDLAGLRAA
ADRMPAPNLNLLRRLVQHLSLVTTHGEQNRMHAVNLAIVFSMSLLPPNASANVSTDLSSM
QTVLKLLIIHCDGVFGSLDGGSTTVVDGASTPSSGQLEAPDMASLTLSESKSTSTVDSLE
MMQAPTSRRRQPAGQNPNRRFSVLNEGTNFSDLAHQFGSQESLH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG