YALI0F31999g - ICL2

Overview

Description uniprot|Q6BZP5 Yarrowia lipolytica YALI0F31999g ICL2 Methylisocitrate lyase
Locus type CDS
Gene name ICL2
Locus tag YALI0F31999g

Location

Species Yarrowia lipolytica Positions 3962549..3964347
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1799 (nuc.)
Previous locus YALI0F31977g Next locus YALI0F32021g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31999g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31999gYALI0F31999g_mRNA-001YALI0F31999g_CDS-001

Nucleotide sequence

 

>YALI0F31999g
ATGCTTCGAACACGATTCATCAACAGCGTCAACAGCGCACGAGCAATGTCTCGAAACATC
AACACCCTGTCGCAATTCCCTTACCCCACCCTTCAGCAAGAGGAGAGCTTCTTCAAGAGC
CAGGTCGAGGACATTGAAAAGTGGTGGGCCTCTCCTAGATATGAGGGCATCAAGCGACCC
TACACCGCCGAGAAGGTGGCCATCCACCGAGGTACTCTCCCCCAGACCTACGCATCTTCC
GTCCAGGCCGAGAAGCTCTTCAACATCTTCACCGAGCGAGGCAAGCAGGGTCTTCCTGTC
CACACAACCGGTTCTGTCGACCCCGTCCAGATGACACAGAGCGCACCTCATCAGGAGGTG
GTTTACATTTCCGGCTGGGCCTGTTCGTCCCTGTTGACTACCACCAACGAGGTGTCACCT
GATTTCGGAGACTACCCTTACGACACCGTTCCCAACCAGGTTGATCGAATCTTCCGAGCC
CAGGGTCTTCACGACAAGAAGGCGTGGCACGAGTGGATGTCTCTGTCCCACGAGGAGCGA
GTCAAGCGAGACCAGGAGGGCAAGGGCCGAATCGATTACCTGCGACCCATCATTGCCGAC
GCTGACACCGGCCACGGCGGTCTGTCTGCCGTTATGAAGCTGGCCAAGCTTTTTGCCGAG
CGAGGCGCTGCTGCCATCCATCTCGAGGACCAGCTGCACGGCGGTAAGAAGTGCGGTCAC
CTTGCTGGCAAGGTCATTGTGCCCACCGGCTCTCACATTTCCCGACTCAATGCCACCCGA
ATGCAATGGGACATCATGGGCTGCTCCAACCTGGTGATTGCCCGAACCGATTCCGAGTCT
GCCAAGCTGCTTTCTTCTGCTGCCGATCCCTCCGACCACGAGTACATCCTCGGTGTCGTC
AAGCCCATCAAGCCCCTGGCCGAGGTCCTCCTCACCGCCGAGGCCAACGGCGCCACTGCC
GATATGGTCAACAAGCTCGAGCTCGAGTGGACCAAGGAGGCCGAGATGATGACCTACGAC
GAGGCCGTGCAGCGAGCCCTGACCGAGGCCGGCAAGTCCGACAAGATCGAGGAGTACCTG
ACCAAGGCCAAGGGCAAGTCCAACTTTGAGGCCCGACAGATTGCCGACGAGCTGGCCGGC
AAGCACATTTTCTTCGACTGGGACGCTCCCAAGACCCGGGAGGGCCACTACCATGTCCAG
TGCGGCATTGAGCCTGCCATCAAGCGAGCTCTGGCCTTTGCTCCTTACGCCGATCTCATC
TGGCTCGAGACCAAGACCCCCGACCTTGCCCAGGCCCAGGCCTTTGCCAAGCGAATCCGA
GAGAAGTTCCCCGGCAAGTGGCTGGTGTACAACCTGTCACCTTCCTTCAACTGGTCTGCC
CATGGCTACTCCGACGAGCAGCTGAAGTCGTTTGTGTGGGACCTGGCCAAGTCTGGCTTT
GTCATGCAGCTCATCTCTCTGGCCGGCCTGCACTCCAACGCCGTCGCCACCCATGAGCTC
TCCACCCGATTCAAGACCGAGGGAATGAAGGCATACGTGGACCTTGTCCAGCGAAAGGAG
AAGGAGCTTGGATGTGACGTCCTGACCCACCAGAAGTGGTCCGGTGCCAACTACCTGGAC
TCCATCATCTCCACTGTCCAGTCCGGATCTTCCGGCACCTCTTCCACCGGTGGCGACTCC
ACCGAGAACCAGTTTTAAGCATGGTACGATGTGTAACTAGCTAACTGGATGAAAGAACGG
CAAACTGAACTTCCAAAGGAAGTGTTTGTCCATGTAATTAACGATGACTTATTAAAGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31999g_CDS-001

Protein length: 566 aa.
Product: Methylisocitrate lyase
Gene: ICL2

>YALI0F31999g_CDS-001 MLRTRFINSVNSARAMSRNINTLSQFPYPTLQQEESFFKSQVEDIEKWWASPRYEGIKRP
YTAEKVAIHRGTLPQTYASSVQAEKLFNIFTERGKQGLPVHTTGSVDPVQMTQSAPHQEV
VYISGWACSSLLTTTNEVSPDFGDYPYDTVPNQVDRIFRAQGLHDKKAWHEWMSLSHEER
VKRDQEGKGRIDYLRPIIADADTGHGGLSAVMKLAKLFAERGAAAIHLEDQLHGGKKCGH
LAGKVIVPTGSHISRLNATRMQWDIMGCSNLVIARTDSESAKLLSSAADPSDHEYILGVV
KPIKPLAEVLLTAEANGATADMVNKLELEWTKEAEMMTYDEAVQRALTEAGKSDKIEEYL
TKAKGKSNFEARQIADELAGKHIFFDWDAPKTREGHYHVQCGIEPAIKRALAFAPYADLI
WLETKTPDLAQAQAFAKRIREKFPGKWLVYNLSPSFNWSAHGYSDEQLKSFVWDLAKSGF
VMQLISLAGLHSNAVATHELSTRFKTEGMKAYVDLVQRKEKELGCDVLTHQKWSGANYLD
SIISTVQSGSSGTSSTGGDSTENQF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG