YALI0F31933g

Overview

Description weakly similar to uniprot|Q12523 Saccharomyces cerevisiae YPL247c unknown function
Locus type CDS
Locus tag YALI0F31933g

Location

Species Yarrowia lipolytica Positions 3954185..3955574
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1390 (nuc.)
Previous locus YALI0F31911g Next locus YALI0F31955g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31933g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31933gYALI0F31933g_mRNA-001YALI0F31933g_CDS-001

Nucleotide sequence

 

>YALI0F31933g
ATGCGTCCGTCTCTAGGAAAGCGGTCGTCATTCTCGCATTTTTCAACTGCCCAGCAGCAA
CCGATATCGCCCCAGCAGCAGCGATACCCGCCTGGGTGGAATCCATACGATGAAGAAGCT
ACAGCTGGTTCGTCGGGACCTCATACAGCAGCCAAGACGAGCAGATACAGCGCGTCGGCG
GCTCCAGGAGAACCATACATGTGGGAGCAGTCTGCCCAGGCTAGCTCCTACGCTCCTTCT
ACAGGGATGAAGTACGCGCCGAGCGACTACCAGCTACCGCGAAGATCTGCATATTTCGAG
TCCACCATGCCGCTGTACTCAGTTAGCTGGAGCACTCCGGCTGCAGACGGCATGTCGTGC
CTGGCGGTGGGCACGTGCAACGATGAGTCCAAGAACAAAATCCAGGTGGTGCACACAGAA
GGCAATTCGTTCAACTTGGCGGCAGAAGCATCGGTGCCATATCCATGCACCAAACTGGCG
TGGGACTCAAGGCTTGATGCTCAGGGAAAGCGCCAGTTTGCCACATCAGGTGACTGTCTG
CGCATCTGGTCGTATGACTCGTCCAAAGGGTTTTTGCAGCAGCGATGTTCGCTGTCCAAC
TCCAAGTCCGGGTCCATTTCGCCTATCACCTCGTTCGACTGGAACAAGGTCGCGCCACAT
CTCATCATCACTTCATCCATAGACACGACATGCACGCTGTGGGACCTCAATACATCGTCC
GCACGCACCCAGCTCATTGCCCACGACCAAGAGGTCTACGACGTGCAATTCACAGCGGGG
TCCACAGATGTGTTTGCATCGGTTGGGGCCGACGGATCGGTCCGAGTCTTCGATCTCCGA
GCCCTCGACCATTCTACAATCATATACGACCCGCCCAAACCACCGCCTCTAGTGCGAATT
GCCGGATGCCCTTACGACGGCAACATTTTGGCTACTTTTGCAGGCAACTCGAGTAAGGTG
CTCATTCTGGATATTCGCCAACCGGGCATGCCCATAGACGTGCTACAGCAGCACCAGGCT
CCTGTGAACGCCATCCAATGGTGCCCCCAGAGCGTGGTTGTAGGAGGACAGCGAAAGAGA
TTGTTGGCATCTTCGTCTGACGACTCACAGATCATCTTGTGGAACACGGCCGTGCCGGGC
GACTACCATCTGGACTCGGCCTTCACGGACTCGGCCGAAGTTAATAACATTTGCTGGAGT
GCATCGGGAGATTGGATTGCAAGCGTTACTAACAAGGGTGTTCAGGGAGTGCGTCTGAAT
TGAGACTGAAAGGGTGAATGACGGCATATACATTTTTCTGGGGTAGAGGTAGACGAGCTT
AGGGTAGCTCTCAGAGACTAATGGTACAGTACAAGTAGTTTTCTGTAAATAGAGTGCATT
TCTACAAGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31933g_CDS-001

Protein length: 421 aa.
Product: Conserved hypothetical protein

>YALI0F31933g_CDS-001 MRPSLGKRSSFSHFSTAQQQPISPQQQRYPPGWNPYDEEATAGSSGPHTAAKTSRYSASA
APGEPYMWEQSAQASSYAPSTGMKYAPSDYQLPRRSAYFESTMPLYSVSWSTPAADGMSC
LAVGTCNDESKNKIQVVHTEGNSFNLAAEASVPYPCTKLAWDSRLDAQGKRQFATSGDCL
RIWSYDSSKGFLQQRCSLSNSKSGSISPITSFDWNKVAPHLIITSSIDTTCTLWDLNTSS
ARTQLIAHDQEVYDVQFTAGSTDVFASVGADGSVRVFDLRALDHSTIIYDPPKPPPLVRI
AGCPYDGNILATFAGNSSKVLILDIRQPGMPIDVLQQHQAPVNAIQWCPQSVVVGGQRKR
LLASSSDDSQIILWNTAVPGDYHLDSAFTDSAEVNNICWSASGDWIASVTNKGVQGVRLN
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG