YALI0F31889g - xpr2-322

Overview

Description uniprot|P09230 Yarrowia lipolytica YALI0F31889g xpr2-322 Deleted version of uniprot|P09230 Yarrowia lipolytica Alkaline extracellular protease
Locus type CDS
Gene name xpr2-322
Locus tag YALI0F31889g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3948660..3950026
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1367 (nuc.)
Previous locus YALI0F31867g Next locus YALI0F31911g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31889g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31889gYALI0F31889g_mRNA-001YALI0F31889g_CDS-001

Nucleotide sequence

 

>YALI0F31889g
ACCCCATCGACGGGCCCTGCCGCCGCTGCCTACTCATCTATTCTGTCCGTGGTCGCTAAG
CAGTCCAAGAAGTTTAAGCACCACAAGCGAGATCTTGATGAGAAGGATCAGTTCATCGTT
GTCTTTGACAGTAGCGCTACTGTTGACCAGATCGCCTCCGAAATCCAGAAGCTGGACTCT
CTGGTCGACGAGGACTCGTCCAACGGTATCACCTCTGCTCTTGATCTTCCTGTCTACACG
GATGGATCTGGCTTTCTCGGATTTGTTGGAAAGTTCAACTCCACTATCGTTGACAAGCTC
AAGGAGTCGTCTGTTCTGACGGTCGAGCCCGATACCATTGTGTCTCTCCCCGAGATTCCT
GCTTCTTCTAATGCCAAGCGAGCTATCCAGACTACTCCCGTCACTCAATGGGGCCTGTCT
AGAATCTCTCATAAGAAGGCCCAGACTGGAAACTACGCCTACGTTCGAGAGACAGTTGGC
AAGCACCCCACCGTTTCTTACGTTGTTGACTCTGGTATCCGAACCACCCACTCCGAGTTC
GGAGGCCGAGCTGTCTGGGGAGCCAACTTCGCTGACACACAGAACGCTGATCTTCTCGGT
CACGGCACTCACGTTGCAGGTACCGTGGGAGGAAAGACATACGGAGTCGACGCCAACACC
AAGCTGGTGGCCGTCAAGGTGTTTGCAGGCCGATCCGCAGCTCTCTCCGTCATCAACCAG
GGCTTCACCTGGGCTCTCAACGACTACATCTCCAAGCGAGACACTCTGCCTCGAGGAGTG
CTGAACTTCTCTGGAGGAGGACCCAAGTCCGCTTCCCAGGACGCCCTATGGTCTCGAGCT
ACCCAGGAGGGTCTGCTTGTCGCCATCGCTGCGGGAAACGATGCCGTGGACGCCTGTAAC
GACTCTCCCGGTAACATTGGAGGCTCCACCTCTGGTATCATCACTGTGGGTTCCATTGAC
TCTAGCGATAAGATCTCCGTCTGGTCCGGTGGACAGGGATCCAACTACGGAACTTGTGTT
GATGTCTTTGCCCCCGGCTCCGATATCATCTCTGCCTCTTACCAGTCCGACTCTGGTACT
TTGGTCTACTCCGGTACCTCCATGGCCTGTCCCCACGTTGCCGGTCTTGCCTCCTACTAC
CTGTCCATCAATGACGAGGTTCTCACCCCTGCCCAGGTCGAGGCTCTTATTACTGAGTCC
AACACCGGTGTTCTTCCCACCACCAACCTCAAGGGCTCTCCCAACGCTGTTGCCTACAAC
GGTGTTGGCATTTAGGCAATTAACAGATAGTTTGCCGGTGATAATTCTCTTAACCTCCCA
CACTCCTTTGACATAACGATTTATGTAACGAAACTGAAATTTGACCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31889g_CDS-001

Protein length: 425 aa.
Product: Deleted version of uniprot|P09230 Yarrowia lipolytica Alkaline extracellular protease
Gene: xpr2-322

>YALI0F31889g_CDS-001 TPSTGPAAAAYSSILSVVAKQSKKFKHHKRDLDEKDQFIVVFDSSATVDQIASEIQKLDS
LVDEDSSNGITSALDLPVYTDGSGFLGFVGKFNSTIVDKLKESSVLTVEPDTIVSLPEIP
ASSNAKRAIQTTPVTQWGLSRISHKKAQTGNYAYVRETVGKHPTVSYVVDSGIRTTHSEF
GGRAVWGANFADTQNADLLGHGTHVAGTVGGKTYGVDANTKLVAVKVFAGRSAALSVINQ
GFTWALNDYISKRDTLPRGVLNFSGGGPKSASQDALWSRATQEGLLVAIAAGNDAVDACN
DSPGNIGGSTSGIITVGSIDSSDKISVWSGGQGSNYGTCVDVFAPGSDIISASYQSDSGT
LVYSGTSMACPHVAGLASYYLSINDEVLTPAQVEALITESNTGVLPTTNLKGSPNAVAYN
GVGI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG