YALI0F31383g

Overview

Description similar to uniprot|P40160 Saccharomyces cerevisiae YNL207w
Locus type CDS
Locus tag YALI0F31383g

Location

Species Yarrowia lipolytica Positions 3903461..3904803
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1343 (nuc.)
Previous locus YALI0F31361g Next locus YALI0F31405g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31383g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31383gYALI0F31383g_mRNA-001YALI0F31383g_CDS-001

Nucleotide sequence

 

>YALI0F31383g
ATGAAATTGAACACGGCTGCCATGAGATACCTCACACCCGATGACTTTCGGGTGTTGACG
GCTGCAGAAATGGGCTCCAAGAACCACGAGGTCGTGCCCACCAAGCTCATCACCCAAATC
GCAAAGCTCAAATCCGTCAGTGCCACCAACAGAAGCATTTCCGATCTGGCCAAGGCCGGT
CTGATTGCCCGGGTCAAGAACGCCAAGTACGACGGCTACCGACTCACATATGGTGGCTAC
GATTATCTGGCACTCAAGGCCTTCATCAAGCGAGATACAGTCTTCTCCGTCGGAGCCCAG
ATTGGTATTGGTAAGGAGTCTGATATTGTGGCTGTCAGTGACGCCAAGGGAACTTCTCGA
GTTCTCAAGATCCACAGACTGGGTCGAATCTCGTTCCGAACCGTCAAGAACAACCGAGAT
TACCTCAAGAACAGATCCAGTGCATCGTGGATGTACCTGTCTCGTCTGGCAGCTCAGAAG
GAGTTTGCCTTCATGAAGGCTCTGCACGACGAGGGCTTCGAGGTGCCCACTCCCATCGAC
CAGTCGCGACATCAGATTGTCATGTCTCTGATTGACGGTTTCCCCATGCGTCAACTGCAG
GAGCACGATGATCCTGCTCGACTCTACCAGACCCTGATGGACTTCATTGTGCGCCTGGCA
CAGCACGGACTAATCCATTGCGACTTCAACGAGTTCAACATTATGATCAGAGAAAACTTT
GATCGAAAGGACCCCAAGTCCGAGATTGTCGTCATTGATTTCCCTCAGTGTGTGTCCATC
GACCACGTGGACGCCAAACGGTACTTTGAGCGAGACGTGGAGTGTATCAAGCTCTTTTTC
CGAAAGAAGTTGGGCTACGTGTCCAAGACCTGGCCCGATTTCGACCGCGACGTGAAGCGA
AAGGGTGAGGCTATCGACAAGCTGGTGGGTGCATCTGGCTTCTCCAAGAAGCAGTCCAAG
GACCTGGAGGCCGCTCTGGCCCAGAGTCTGGAGGTGGACGAGAACGACGTCGACGACCAG
ATCCGAGAGGACGATGAGGAGAACGAGCAGCTTGCAGAGGACGCTGAGATGATCGAGGAT
GCTGATCAGGAGGAGCACGACATTGAGGAGGAGGAAGACGACGAGGAAGACGAGGAAGAA
GAAGAGGAGGAGGAGGAAGAAGAGGAGGAAGAAGAGGAGGATCCCCTCGAGAAGGCCATT
GCTGAGCGAGGCATTGAGAACCTCAAGATGGACAAGTTGGGTAACTACATTTTGGATTAA
TTGCATGTGGTGGGGGTAAATCAAGGAGAGGCGGGAATCGACGCCACTCCTAGGTAATAA
TATAAACAGTACATTATTGAATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31383g_CDS-001

Protein length: 420 aa.
Product: Essential serine kinase involved in the processing of 20S pre-rRNA, putative

>YALI0F31383g_CDS-001 MKLNTAAMRYLTPDDFRVLTAAEMGSKNHEVVPTKLITQIAKLKSVSATNRSISDLAKAG
LIARVKNAKYDGYRLTYGGYDYLALKAFIKRDTVFSVGAQIGIGKESDIVAVSDAKGTSR
VLKIHRLGRISFRTVKNNRDYLKNRSSASWMYLSRLAAQKEFAFMKALHDEGFEVPTPID
QSRHQIVMSLIDGFPMRQLQEHDDPARLYQTLMDFIVRLAQHGLIHCDFNEFNIMIRENF
DRKDPKSEIVVIDFPQCVSIDHVDAKRYFERDVECIKLFFRKKLGYVSKTWPDFDRDVKR
KGEAIDKLVGASGFSKKQSKDLEAALAQSLEVDENDVDDQIREDDEENEQLAEDAEMIED
ADQEEHDIEEEEDDEEDEEEEEEEEEEEEEEEEDPLEKAIAERGIENLKMDKLGNYILD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG