YALI0F30943g

Overview

Description weakly similar to uniprot|P25044 Saccharomyces cerevisiae YDL230w PTP1 protein tyrosine phosphatase
Locus type CDS
Locus tag YALI0F30943g

Location

Species Yarrowia lipolytica Positions 3860239..3861229
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 991 (nuc.)
Previous locus YALI0F30932g Next locus YALI0F30965g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30943g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30943gYALI0F30943g_mRNA-001YALI0F30943g_CDS-001

Nucleotide sequence

 

>YALI0F30943g
ATGGGACACCTCGATTTTTTAGCCATGGAAAGGCAGCTTCTATCCTACAAACTACCCCTA
TTCCGCAGAACATTTGCCATCATGTCCCGATCCATACAGGAGTCGTTCTCGCTCTTGAAC
CAGCGAGAAAAGGACCGACTGAAACGAGTCAGCCAAAAAGAGGGGCTCGCCAATCCAGAC
CGCAACAGATACAGCAATATTATACCATGGGATCACACGCGAATCAAGCTCCGCACTAGC
AAGGATGGTAACAACTATATCAATGCCAACAGAGTGACCTTGGTGGCAAAAAAGAACACC
AAAACCTACCACAAGACTTACATAGCCACCCAGGGACCGTTACGACAGACTGCAGGTCAC
TTTTGGCAGATGGTGCATGACACAACGACGGAACAGGGACAGGAGAGTGACAAGCCAACT
GTGGTGATCCAGGTGACCCCCTTCGAAGACAACCACGGCGAGAGATGCTGTCAGTACTAC
ATTTCGCGGAAGGGCCAAGTTTTCGAGGTGGATGGAGAAGGAGATGTGCTTACGGTGGAA
GTTAAAGATAACAGCGAAGTGGGCCCCACGAAGGTGACTGAATTTCTGGTAACAAAAGGG
TCAACTGGAAAGGTTAAGAGGGTTGTTCATTATTACTATCCTAACTGGGCGGACTTTTCC
GCTCCTGGAGTCAACACTGATATTGACGATATAGTCAAGTCAGCGGGTCCTATCACAGAT
AGCCCGCCCATCGTCCACTGTTCAGCTGGTGTCGGAAGAACAGGTACTTACATTGTGGCT
GATTTTTTGACCACTTTCCAAAAAGAACTTCAGGGTGAGGATATTGTATGTAGCCTGGTT
GATCAGATGAGACAACAGCGAAGCCATATGGTCCAGACTATCTCTCAGTACGAGTATCTT
CACTCCCTACAGACTGAACTTCTGCATTGACATGTTGTGTGTATTATAGACCCCGTACAT
AAATGTTATTAATATATAGACTGCATTTGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30943g_CDS-001

Protein length: 310 aa.
Product: Conserved hypothetical protein

>YALI0F30943g_CDS-001 MGHLDFLAMERQLLSYKLPLFRRTFAIMSRSIQESFSLLNQREKDRLKRVSQKEGLANPD
RNRYSNIIPWDHTRIKLRTSKDGNNYINANRVTLVAKKNTKTYHKTYIATQGPLRQTAGH
FWQMVHDTTTEQGQESDKPTVVIQVTPFEDNHGERCCQYYISRKGQVFEVDGEGDVLTVE
VKDNSEVGPTKVTEFLVTKGSTGKVKRVVHYYYPNWADFSAPGVNTDIDDIVKSAGPITD
SPPIVHCSAGVGRTGTYIVADFLTTFQKELQGEDIVCSLVDQMRQQRSHMVQTISQYEYL
HSLQTELLH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG