YALI0F30921g

Overview

Description weakly similar to uniprot|Q07660 Saccharomyces cerevisiae YDL231c BRE4
Locus type CDS
Locus tag YALI0F30921g

Location

Species Yarrowia lipolytica Positions 3855772..3859585
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3814 (nuc.)
Previous locus YALI0F30899g Next locus YALI0F30932g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30921g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30921gYALI0F30921g_mRNA-001YALI0F30921g_CDS-001

Nucleotide sequence

 

>YALI0F30921g
ATGCAACGAGGTCGCCAGAGACGCGAAGAGTCGGAAGACTATGGAGCAGAGGCCATCTCC
AACAACCCTGGCCTGCGCCACCTGACTGTAGGACATGCTGCGGGTCACAGCCACCCGTCC
TCTCACAGCAGTAGTCAAAGCCCCACAACCCCTTCATTTGAGCTATCACCCCCGCCACCA
GAAGAAAGCAGCAGCGCCGACAAACAGGTCCGCATAGCCGACGAAGAGCCGAATCTGGAG
CTTGTCAACCGACGTCTGGCAGAGAGAAGAGGAAGAACACGAAACGAAAGTAGAAGCCGC
AGCAGAAGCCGCAGAGGATCACGCAGTGGAGAGCGAGTTCCACGCCAACGGTCGTCGTTA
CACCTCGGCGATCTGAACGTCTCCATGCCTATTTCGACAGGCTCTTATGGATTTAGACCA
CACTCTCCGTTTTTGACCCCACAGGGTCTCAGTGGAAGAAGTAGACCTGTCAGCAGATCT
GGTAGTCCCACTCGTACACCAGCCTTTACACCGGGACATTCACGCCACGGATCGCGCGTC
AACATAAAAACTGTGAACTCCACACCCAACATGAGTCGTTCTGCCTCTTCAGCCCGAATC
CAGCGGATCGGATCGGACTACTTCCAGACATTATCCACGCGAATGAAGCGAATGGATCAC
ACAACCGCCCATACTGAAGACTCGGAGCTTTTGGAGACATACGGACTGGAAGAACTACGA
GAAGGATACTTTGATGCCATCTTCGAGCCGGCAAGAAAAGCGGAGGAAAACGCCAGAATG
GTTGTGCTTCAAATGAGGGAGAAGGCACAGGCAGAGGCTAACCAGGTAAAGTCGCCTATT
CAGCTATTCCTGGGCATGTTCGTGTCCACCTACCACGCCATTAGAACCACTCTGCTTACC
AAGAATGGTATCACGGTCCTGAAGGCGTTCTTGGCCTACTTTGTGGGCTTTCTACTTTGC
ATTATTCACCCCACAGCGCGTTGGCTTGGTCCGCACTGCTATTTTCTGCCAATAGCCACC
ATCCTACACCATCCAGGACGTCGCACGGGATCACAGATCGAAATCACCGTTCAATGTATT
GTTGGCCAGGCTCTTGGAATGGGTATTGGAGCTCTTGCGCTGTACGTTAGTGACTCCACT
ACGACGGCAAGAAAAGGACATGGTGGACTTTTGGCAGTGGCTGTCATTCCAACTATTGCC
GTTGTTTCTTGGATGAGAGCCTGCTACATTCGTCTCTACCACGGGTTCCTGTCAATGGGT
ATTGCTTTGCTTGCCATGACAGACATTGATGTGAGTTCAGACTTCCACTGGCGAAGTGCA
TGGGACTTCGGTATTCCTTATTTATTTGGCATGCTCTTGCCAGTTGTGATCAACCTTTTG
ATCATCCCCTCGATTGGTCAAGGTGATATGGTCACTTGTATGGCTGACGCGTTGAGTTGC
TGTCGAGACTGTGTGCACAAAATGATGGCCACGGAACCTGGTGTCGGTAAAGAAGCCCAA
GATGCTCTCAATGCTCAGTCCATCGCTCTGTCTGACATTCACCGAAACATGTGCAACGAA
ATCATGTTGACCACTTTCTCCAAGGACAATGTGCGAATCGTCCGAAACCTCATCCAAACC
GTCATCGGTCATATTCGAATTGTTGACTTACCCTGTGAGATCTTCAGTGTTAACGTTGCT
GCCGCTAAGGAGGACGCAGAAGAGGACTACTTCAACCAGCACCCGCATCACGCTATTCCC
GACATGGCTCCCAAGATTTTTGAGCTGTTCCAGGAAGGAGCACGTGATCTCGTTCTTTCT
ATCATGGAAGCCCTCACTTTGGCGGAAGAGTTCATCAAGAACATCCGACATCCACCGGAG
GAGATTTCTCTCAAGTTTCAGAAGGCCATGACAAATCTACAGCACAAGATGAACCACCTT
GATGCCCAGTATACCAAGCTTATTGTGGACCAACAAGAGTTGAACATATCTCGACGAGCA
GCTATCAACGCTCTGTTTGTTCAGCGACTGTCTCACTGTGGCCATGCTGTGTTCAATCTG
CTGCGTCACTTGCATGGCATGTCCCTAGAAACACCTCACTGGCGTCTCTCGTTACCCCGA
TACCCCTGGAAGCGAGCCCTCACCTGGTCCAATACCCAATCTTTGCATGACCGAGGTGGA
AAGACAGCTGGTCATTACTTTCGTGTCAAAGCCGAAGTTGAAGAGATCTTCCATCGAACA
TTCAACATGAATACTTCTCGTCATATTGTCCGAGAAGGAGAGAAGAACCAGAAGCAGCAA
ATGTGTGTCAATGCTGTTGATCATTCCGACTTTGATGCTAAGCATGGTGACATTTCGTCT
GCTCGTTACAAGCTGTGGAAGATTCTTCATAGACTCCAGCGATTTGAGAGTAAGTTTGCT
GTGAAGACTACTATTGCTGTGACTCTTCTCTCTCTTCCTGGCTGGCTGGAAGGTCATGAC
TGGTACCAGCACTACGACGCCTTCTGGGCTCCGATCCTGGTGCTCATTTCGCTGCATCCT
CGAGCTGGTGGTAACGCCCATGATCTGATTGTGCGAACTGTGGTTGCTATTATTGGTGCT
GTGTTTGGTGCCCTTGCCGCTGGAATCTGGCAGGGTCACAAGGCCAGTCCATATATTATG
GGTGTCTTCTGTGCTGTCTTTATGATACCTTGTCTCTACCGTTTCACAGTATCCAATCAT
CCTCGCTCCGGTCTCATGGGTTGCTTGTCTTTTACAATAGTCGCCTTGGGTATCTACACC
GATAAACTGCAGGGACCTAAGCGATGGCGAGATGCAAACCCAGTCACGGGTACCTGGACC
CGTGCTCTTGGCATTCTGATCGGTCTGTGGTCCGCCATCCTCATCTCTTGGATCTTATGG
CCCTTTGTGGCTCGTACCGAGTCTCGTGTCTTCACTGCCGATATGCTGGGTCATGTTTCG
CAGTGTTACCAGATTGTGGCTGATCGATACCTATACCATGATCTCGACGATGATCCTACA
ACGCTGGCCATTGAGCTCTCTCAGATTCGAGAGGCACGTATGAGACAGGGTTTTCAGGCT
TATCGTGAGCTCATTCTGTCGACCCGCCATGAGCCTTCTCTCAGAGGTGATTTCCCTATC
CAGACGTACCTGGCGCTGTTTCAATCTTGTGAGCATGTGTTCAACCGTATTGTCGAGGCG
CGTATCTCATCGGTATACTTCCGAATCTATGAGTTCGACGAAACCAAGGAGACGACTGCT
CACCTGCTTTCTTATCGACGAGACGCTATTGCTGCTACCATCATGGTCCTGTTCATCATT
GCAGACTGCTATAGAGCTCGTAGACCAGTTCCTCGGTACCTCCCGTCCTCCAAAATGGCT
CGTAAGCGACTGTTTCAGACCATTGCTTCTCTGGAGACCATTATGTTGGATGAGTCTGAC
AATGAGACACATGTTCAGGACCATGAGAAGGACGCCCAGAAGATGGCTTCGATTCTGGCA
GGATCTCGAAAGGTTGGCGAGCAGCCTGTTTTCCAAAACCCCTTTGGAAAAACAGACGAA
TCTGGAGAGAAGGAGAAGACTGAGGATGACGTCTCATCTCCATTGGCTGGTCCCCTTCAT
GGCGACTCGGTCACTGAACGAAAGAGAAAATTCTGGACTATTATTCACGAGTCTGCTTTT
GCGACTGCTTTTACAGACATTTCGGAAGAGCTCGAGAAGATCGTCGGCTTTTCCAAATCT
GCTTTGGGCGAGGAGACCTAAACGCTTTCAATAACCTACACGTCACCCCAAAACATATCT
ATCTATACATTTAATAATATTTGAATTGCATGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30921g_CDS-001

Protein length: 1247 aa.
Product: Conserved hypothetical protein

>YALI0F30921g_CDS-001 MQRGRQRREESEDYGAEAISNNPGLRHLTVGHAAGHSHPSSHSSSQSPTTPSFELSPPPP
EESSSADKQVRIADEEPNLELVNRRLAERRGRTRNESRSRSRSRRGSRSGERVPRQRSSL
HLGDLNVSMPISTGSYGFRPHSPFLTPQGLSGRSRPVSRSGSPTRTPAFTPGHSRHGSRV
NIKTVNSTPNMSRSASSARIQRIGSDYFQTLSTRMKRMDHTTAHTEDSELLETYGLEELR
EGYFDAIFEPARKAEENARMVVLQMREKAQAEANQVKSPIQLFLGMFVSTYHAIRTTLLT
KNGITVLKAFLAYFVGFLLCIIHPTARWLGPHCYFLPIATILHHPGRRTGSQIEITVQCI
VGQALGMGIGALALYVSDSTTTARKGHGGLLAVAVIPTIAVVSWMRACYIRLYHGFLSMG
IALLAMTDIDVSSDFHWRSAWDFGIPYLFGMLLPVVINLLIIPSIGQGDMVTCMADALSC
CRDCVHKMMATEPGVGKEAQDALNAQSIALSDIHRNMCNEIMLTTFSKDNVRIVRNLIQT
VIGHIRIVDLPCEIFSVNVAAAKEDAEEDYFNQHPHHAIPDMAPKIFELFQEGARDLVLS
IMEALTLAEEFIKNIRHPPEEISLKFQKAMTNLQHKMNHLDAQYTKLIVDQQELNISRRA
AINALFVQRLSHCGHAVFNLLRHLHGMSLETPHWRLSLPRYPWKRALTWSNTQSLHDRGG
KTAGHYFRVKAEVEEIFHRTFNMNTSRHIVREGEKNQKQQMCVNAVDHSDFDAKHGDISS
ARYKLWKILHRLQRFESKFAVKTTIAVTLLSLPGWLEGHDWYQHYDAFWAPILVLISLHP
RAGGNAHDLIVRTVVAIIGAVFGALAAGIWQGHKASPYIMGVFCAVFMIPCLYRFTVSNH
PRSGLMGCLSFTIVALGIYTDKLQGPKRWRDANPVTGTWTRALGILIGLWSAILISWILW
PFVARTESRVFTADMLGHVSQCYQIVADRYLYHDLDDDPTTLAIELSQIREARMRQGFQA
YRELILSTRHEPSLRGDFPIQTYLALFQSCEHVFNRIVEARISSVYFRIYEFDETKETTA
HLLSYRRDAIAATIMVLFIIADCYRARRPVPRYLPSSKMARKRLFQTIASLETIMLDESD
NETHVQDHEKDAQKMASILAGSRKVGEQPVFQNPFGKTDESGEKEKTEDDVSSPLAGPLH
GDSVTERKRKFWTIIHESAFATAFTDISEELEKIVGFSKSALGEET*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG