YALI0F29997g

Overview

Description weakly similar to uniprot|Q03124 Saccharomyces cerevisiae YML127w RSC9 chromatin binding activity
Locus type CDS
Locus tag YALI0F29997g

Location

Species Yarrowia lipolytica Positions 3751542..3753402
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1861 (nuc.)
Previous locus YALI0F29975g Next locus YALI0F30004g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29997g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29997gYALI0F29997g_mRNA-001YALI0F29997g_CDS-001

Nucleotide sequence

 

>YALI0F29997g
ATGTACAACGATAACATGCCCCGTCGCTCGACGCGTTCGTCGCTAGCAGGATCCCCTGGT
CAGGTCTCGGGATACCAAGGAGGCTCTCCTTACGTTGATGGAGGTATGCCTGGGGGTAAC
CACGGTGGAATGGTCCCGCATCAGGGATCGAACCCCTACGAGTTTGTGCCGGTGCCTCCG
GGTCCTCTGCCTGTTCCAGTGATGACTCCGACTGTCAACCCGCCCATGTTCCCTGTCAAA
AGGCCCACGCCAACCTCAATCGCCAAGGCCAACGCTTTTGGAGTCGGCCACTTTGGCATT
GATTTCCTCACACGTATCACCTTTTCGCTACGATCAGGTATCGACTCGGAAGTCGACTGG
GCTCTCACAGCACTCGTCCAAGCAACCTTCAACGCCCCTGACCAGTTCAAATTCCGACTA
AATGAGTCTCTCATCGCCGACCTGCTGGGCCGTGTTCTCAAGGCCCGGTTTTTGACCCAC
AAGGAGTCCGCCGACGGAGAACACGTCGGAGACACGGACGCAGATGATCGAGTGCATCAA
AGTGTGCTAGATATCATGCTCATTCTGAGAAACGCCGCTCTGGACCCCGAAAATGCCCAG
TTTCTGGCTACTAGTGACAAGGGTCTTGAGGTGGTGCTCAAATGTTTGCAGGTCTCGCCC
TCCTCCCTCACATCCGAGGTGCTCAGCTATGCCGTTGACATCTGCGAGTCTATCTCGTTC
TATGTGTCTCCTTCCTCTTACGACGACCCTCTTCTCCAGGCTGTGGCTCATCTGTTGGAG
ACCTCGTCTGACCGAGCTATCATAATCTCTACCACTCGAGCACTCACCCGAATGCTGGTC
CATGAGTATCACGCCCACCCAGAAGCAGAGACCGAGCCGAAGGAGGACGCCTTCCCTATC
ATTACTCTGTTGGCTCGACGATGGCATCAGATCGTCGACAAGACTGTGCAGATGCTGCTG
GTTGAGGCTGACGAAGAGCTCATAATTGCTGCTCTCGATTTCCTCTATCAGATCACTCGT
CGAGGTGCATTTGTCACTCGTCTGTTAGAAAACAATTCGAACGCTGAGATTCTGTCGACT
CACCTGGCCCGTCTGTTACGGTTCGAGTTTCCCCACGAAAAGTTCATTGACTACATCCGA
CTTCCCCCACGGGCTACTCCGGGCCCTGTAAAGAAGAATGTCCCTACGGTCGACTCGCCG
GCCCCACGTCTTCCTGAGGATGTTCTGAACAACCTTCTGACGATGCCTGAGCCCCATCGA
GCCAATGCATGGATGCGAGCTTCATACGAGGAGACTAGCGGAGGTGAGGTGACCCAGATT
TCTCTGTGGAAGTCGTACGAGTCGCAATTTGAGCCCTACTGTAAGGAGGGCTCTGCTCCC
GGCGTGCACAGACTGCTCCCGGCCGTGGAGTTTATCAAAAATGTCAACGCGGCCTTCACT
CGAAGTGCCGCCATGGTTGTCAGTCTCAACGATGGAACCAAAAAGTTCATTATCAAGGGT
ATTCAACCCCGAAAGGAACCCGTGGACCCTGCTACCATCGATGCACAGAAGCGCGCGGAG
TTTGAACACCGTCGAAAGATGGAGGCCAGATATGCCGAGTACGATCAGGCTCGACGATAC
AGACTGGACAACAAGAGTGGAGTGTCTCCGGCCGCTATTCTGGTCATGACTAACATTGCC
AAGAGCGATCTGGGCAAACTGGCACTGACTCATGTGGTTGACAAGGTGGTGTATGCTGGT
ACTGTCAACCCACACATTGCCCAGTACATGTTCCCCTTATTGGGCGAGTTGGAGAATGTG
AAGCCCGAGGCATAGATGGGTACAATATAACCAGGAATTAATGTATTTGTATTTGTATGA
T

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29997g_CDS-001

Protein length: 605 aa.
Product: Conserved hypothetical protein

>YALI0F29997g_CDS-001 MYNDNMPRRSTRSSLAGSPGQVSGYQGGSPYVDGGMPGGNHGGMVPHQGSNPYEFVPVPP
GPLPVPVMTPTVNPPMFPVKRPTPTSIAKANAFGVGHFGIDFLTRITFSLRSGIDSEVDW
ALTALVQATFNAPDQFKFRLNESLIADLLGRVLKARFLTHKESADGEHVGDTDADDRVHQ
SVLDIMLILRNAALDPENAQFLATSDKGLEVVLKCLQVSPSSLTSEVLSYAVDICESISF
YVSPSSYDDPLLQAVAHLLETSSDRAIIISTTRALTRMLVHEYHAHPEAETEPKEDAFPI
ITLLARRWHQIVDKTVQMLLVEADEELIIAALDFLYQITRRGAFVTRLLENNSNAEILST
HLARLLRFEFPHEKFIDYIRLPPRATPGPVKKNVPTVDSPAPRLPEDVLNNLLTMPEPHR
ANAWMRASYEETSGGEVTQISLWKSYESQFEPYCKEGSAPGVHRLLPAVEFIKNVNAAFT
RSAAMVVSLNDGTKKFIIKGIQPRKEPVDPATIDAQKRAEFEHRRKMEARYAEYDQARRY
RLDNKSGVSPAAILVMTNIAKSDLGKLALTHVVDKVVYAGTVNPHIAQYMFPLLGELENV
KPEA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG