YALI0F29623g

Overview

Description similar to uniprot|C7Z8R0 Nectria haematococca hypothetical protein NECHADRAFT_94354
Locus type CDS
Locus tag YALI0F29623g

Location

Species Yarrowia lipolytica Positions 3720153..3721316
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1164 (nuc.)
Previous locus YALI0F29579r Next locus YALI0F29645g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29623g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29623gYALI0F29623g_mRNA-001YALI0F29623g_CDS-001

Nucleotide sequence

 

>YALI0F29623g
ATGCTAGCAGTCGTCTCTGAAAATCACAAGCTCTATCTTCGAAATACGCCAAAGGCGAAG
ATTGCTGCTCCTAACGATATTCTCGTCAAGGTGGATTATGCCGCACAGAACCCCATTGAT
GTGATTCTTAATGACAACAAGATGTTGAAAGATGGCAAGATATCAGGAAATGACTTTGCA
GGAACCGTTGTTGCCATTGGATCTAGTGTACGAGATCGAACGCTGGTGGGGAAACGAATC
GCTTCCTTTGCTGATGGTCACAACAATGACTACCCTTCGGGTTCCTTTGCCGACTACGCC
ATTGCGAAAGATGGTATCTATACAGTGCTACCTGACTCAGTGAGTAGTGTCGAAGCCGCT
ACAATTCCTTTAGCATACGTTACTGCTGTCCACGGTCTTTACACCTCGGCTCGGCTCGAT
CTAGAAGGGAAACCAGCACAAACTATTCTCGTATGGGGAGGTAACTCGTCCGTGGGTAGA
TATGCACTCCAACTGGCCAAGCTCAATGGCCACCACGTTCTCACTACAGCCAACGGAGGC
AATAACGAAGAGCTGATTAAACTCGGCGCGGACAAAGTGTACAACTACCGAGATACAGAT
GTGGTCGACAAGATCAAGGCTGATTATGGTCCCATCAAGTATATTTTCGACGCCATTGGA
ACAGCTTCTTCAGCTTCTGCATGTGCCAAATCTGCTGCTGATCCCAGTCACTACACCACT
GTCAGACCGGATGCAGCACATACAAAAGAATTCCCGAGTTACATTACCGTTTCGACCATC
ATTGTGTACCAGGTGTTCTTCACAGATACGGAAGAGGCAGTTGTTGGAGATAAGTATCTA
ACGGATGCATATACGTGGCTGAAGAGCAAAAAGCTGGTCTGCAATGTTCCAAAACTTGTT
GGAGGCTTGGACAAGATTGAGGAAGGATACCAGCTTCATCGAAAGTACCAGATCAAGGGA
GTGAAACTCGTTTACCGAGTAGGTGAGGTGGGGCGACTCTAGCTACTAGCTATAGCATAG
GTAGTCCCAACTATTCATCTGACATCATAATCTCTTGGTGTGCCTACAGATGAATTTTCA
CTGTGTCCAACATATGATCGTAATAGGGCGTAATTAGCCACTGAAAGTAAAACGGAGTCC
AAATATCATACAAGTGTTCTGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29623g_CDS-001

Protein length: 334 aa.
Product: Conserved hypothetical protein

>YALI0F29623g_CDS-001 MLAVVSENHKLYLRNTPKAKIAAPNDILVKVDYAAQNPIDVILNDNKMLKDGKISGNDFA
GTVVAIGSSVRDRTLVGKRIASFADGHNNDYPSGSFADYAIAKDGIYTVLPDSVSSVEAA
TIPLAYVTAVHGLYTSARLDLEGKPAQTILVWGGNSSVGRYALQLAKLNGHHVLTTANGG
NNEELIKLGADKVYNYRDTDVVDKIKADYGPIKYIFDAIGTASSASACAKSAADPSHYTT
VRPDAAHTKEFPSYITVSTIIVYQVFFTDTEEAVVGDKYLTDAYTWLKSKKLVCNVPKLV
GGLDKIEEGYQLHRKYQIKGVKLVYRVGEVGRL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG