YALI0F29381g

Overview

Description some similarities with uniprot|O93914 Aspergillus niger PDI related protein A
Locus type CDS
Locus tag YALI0F29381g

Location

Species Yarrowia lipolytica Positions 3701805..3703562
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1758 (nuc.)
Previous locus YALI0F29359g Next locus YALI0F29403r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29381g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29381gYALI0F29381g_mRNA-001YALI0F29381g_CDS-001

Nucleotide sequence

 

>YALI0F29381g
ATGAGATGTCTGCTGATATTGCTGTTTTTGGCGTCGGTGGCGCTCGCCTCGTTCTACAAA
AACAGCCCCGTCGTGGAAGCCAAGGGTAACTTGGGCCCGGTGCTCAAGTCCAACAAAACC
TCCATTGTGGAGTTCTATGCTCCATGGTGCGGACACTGTCGAAACCTGTTGCCCGAGTAC
GTCAAGGCCAGTAAGGGTCTGCGAGGTCTCGCCAACGTAGTCGCCGTTGACTGTGATCAG
GAGATCAACAAACCCGTATGTGCCCAATGGAAGGTCCAGGGTTTCCCCACCCTCAAGATC
TTCCGACCCTTCAACGATCCCAAGACCGGAAAGAAGATGCGGCCCATGGTTGAGGACTAC
AAGGGTCCTCGGGAGGCCGCTACCATAGTCAAGGAGGTTTCTGGTCGAATCAAGAACCTA
ACAAAGCGTCTCTCTAGTGTCGCTGACCTGAAGAGTCTGATGGAGAGCACCGAAGAGGAC
GTCCACCACATACTGTATCTTCCCGCTACCACCAAGAAGCTCGTTCAGGTTCCTCCCGTG
CTTAAGGCCATCGCAATTGACTTTGTCGATACGGCCAAGGTCTCCTTCGCTCCCGGAAAG
GCGGTGCCTGATATTGTCAAGCATCTCCAGCGAGAGTACCCTTCTCTGTCCAAGCTGGAC
ACCACCAAGAGCCAGATTGTGCTGCTCAAAAAGGGCTACCATCCTGCGTCTTCCAACAAG
GACATGTCTCACGAGGGCATCCTCAAGTTCGTTAACCAGTACGTTATCATTCGAGAGGGC
AAGAACCGAAACGCTCCTGCTAAGAAGACTCTCAAGGAGTTCATCGTCGAGTCCGACGTC
CCCGATCTCACTACCGACAATGACTCTGTTGACGAGGAGGATGAGATTCTTACTGATGCC
AAGGACGATATTGAGGTCGAGATTGTGGAGCAGGTTGAGGAAGTCACCCAGGAGGAGGCC
GCTGCCCAACCCGATACCGATACCGACGATACTGAGCCCGAGCCTCTTATGGCAGATTCA
CCTTCTGATTCCGACTCTGACACCGATTACGATGCTGATACTGAGGAGATCGAGGACGAA
AAGCCCTCCAAGATCACTCCTACTCCAGAGCAGATCAACCTCAACGGCGGACCAGAGCAC
CAGAAGGCCCAGATTCAGTCAATTATTGACAGGTACGGAGGAGAGGAGAAACACCCTCGA
CAGGCCTCTCGAATCTACTCCTTCGCCGAGCTGCGAGATGCTTGTCTCAAGTCCGACTCT
CCCACATGTGTTATCATGTCCACTTCTCCTTACAGCTTTCAGACCGACTTGCTGACGATC
CACAAGGCTGCCCGACATGCCAGTGACGACACCTACAAGAAGGTCAAGTTTGTCTACTTT
GTGGACATCACTGACGAGCTCGAGAGGCTTGCCGAGGAGCTTGGAATGGGCCCTTACACA
TACATGAAGCCTCCAGCTGACGCCAAGGGCGGAAAACACCATCTTCATGAGGGATCTTAT
GTCCTTCTGGATATCCACAAAAACAAGGTCTACAAGATGCCCAGTTCTATCGTTAAGAAC
GACGGCAACATTGTCAACTTCGCCACCAAGGGCTACAAGAAGGTGGATGGCAAGAAGCTT
CCTCCCAGATACAGATTTGAGTACTCTGACCGGGACGAGTTGTAACTACAAGATTGGTAC
ATACGATAACACACACATGCTAGTAGTATATATAGATATAAAAATAATAATACGAATAAC
AACAATGCTAAACAGGCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29381g_CDS-001

Protein length: 555 aa.
Product: Conserved hypothetical protein

>YALI0F29381g_CDS-001 MRCLLILLFLASVALASFYKNSPVVEAKGNLGPVLKSNKTSIVEFYAPWCGHCRNLLPEY
VKASKGLRGLANVVAVDCDQEINKPVCAQWKVQGFPTLKIFRPFNDPKTGKKMRPMVEDY
KGPREAATIVKEVSGRIKNLTKRLSSVADLKSLMESTEEDVHHILYLPATTKKLVQVPPV
LKAIAIDFVDTAKVSFAPGKAVPDIVKHLQREYPSLSKLDTTKSQIVLLKKGYHPASSNK
DMSHEGILKFVNQYVIIREGKNRNAPAKKTLKEFIVESDVPDLTTDNDSVDEEDEILTDA
KDDIEVEIVEQVEEVTQEEAAAQPDTDTDDTEPEPLMADSPSDSDSDTDYDADTEEIEDE
KPSKITPTPEQINLNGGPEHQKAQIQSIIDRYGGEEKHPRQASRIYSFAELRDACLKSDS
PTCVIMSTSPYSFQTDLLTIHKAARHASDDTYKKVKFVYFVDITDELERLAEELGMGPYT
YMKPPADAKGGKHHLHEGSYVLLDIHKNKVYKMPSSIVKNDGNIVNFATKGYKKVDGKKL
PPRYRFEYSDRDEL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG