YALI0F29337g

Overview

Description similar to uniprot|P23542 Saccharomyces cerevisiae YLR027c AAT2 aspartate aminotransferase; similar to uniprot|P23542 Saccharomyces cerevisiae YLR027c AAT2 aspartate aminotransferase
Locus type CDS
Locus tag YALI0F29337g

Location

Species Yarrowia lipolytica Positions 3697135..3698681
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1547 (nuc.)
Previous locus YALI0F29315g Next locus YALI0F29359g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29337g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29337gYALI0F29337g_mRNA-001YALI0F29337g_CDS-001YALI0F29337g_mRNA-002YALI0F29337g_CDS-002

Nucleotide sequence

 

>YALI0F29337g
AGTGAGTATGAATTGAACGCATTGACTGCTGAAGTGACCTGCCAAATCGACGATATTACG
CACCAGCCAAGCCACCAACTTCACAACCAGTGAGCGCCTTGTGGAAACAGACCTTTGCGC
ATTTGCGCTCTTGAGTCGTCGTGCACAAACAGAAAAACACGATTTCGCTCGACCTCGCAC
CCCAACAACAACTAACACAGTGTCATACTTTGCATCAGTCCCCGCAGCTCCCGCAGATGC
CCTTTTCGGCCTCATGGCCAAGTACAAGGCCGATACCTTCGACAAGAAGGTCGACCTCGG
AGTCGGAGCCTACCGAGATAACACCGGAAAACCCTGGGTCCTCCCTGTCGTCTCCAAGGT
CGATTCTCTGATTGTCGCCGACCCCACTGCCAACCACGAGTACCTCCCCATCACTGGTCT
GCCAGACTTCACCAAGTCTGCCGCCAAGCTGATTCTGGGGCCTGACTCTCCTGCCATCAA
GGAGAACCGAGTTGCCTCTTGCCAGACAATCTCTGGAACTGGAGCAAACCATCTGGGATC
TCTCTTCCTGTCGCGGTTCCCCTCCTCCGCCGCTCCCCCCAAGAGCGTCTTCCTCAGCCG
TTCTCCCCCTTCCCCTGGAGCAACCGGAGATACTCCTCCCCGAGCTGCTGGCGGCCGAAT
CTGGATCTCCAACCCCACCTGGGCCAACCACAAGCAGATCTTCGAGAACGTCGGTCTGAC
CGTTAAGCAGTACCCCTACTGGGACCCCAAGACTCTAGGTCTGGACCTCAAGGGCATGCT
CAACGCTCTGGAGAATGAGACCCGACCCGGAGACATTGTTCTGTTGCACGCCTGCGCACA
CAACCCCACCGGTGTTGACCCTGCTCGAGAGGAGTGGGAGAAGATTGCCGCTGTCTGCAA
GTCCAAGAAGCTCTTCCCCTTCTTCGACTCTGCCTACCAGGGCTTTGCCTCCGGTGATCT
CGAGCGAGACGCCTGGGCAGTCCAGTACTTTGTTTCCCAGGGCCTGGAGCTGCTCATCTG
CCAGTCCTTCGCAAAGAACTTTGGCCTGTACGGCCAGCGGGCCGGATGCCTGCACTTCAT
CACCCAGACCGCCAAGGCGTCGGAGAACGTCAAGTCACAGCTTGCCTTCCTGCAGCGATC
AGAAATCTCCAACCCTCCCATCTACGGTGCCCGAATTGTGGCCCGAGTTCTTAACAACCC
CGAGCTCTTCAATGAGTGGAAGGAAAACCTGCTGGAGATGGCCAACCGAATCAAGAGCAT
GCGAGATGCGCTCAAGAGCGAACTCATCAAGCTTGATACTCCCGGTAACTGGGACCATAT
CACTAACCAGATTGGTATGTTCTCTTTCACCGGTCTGTCGCCCCAGCAGGTGGACCGACT
GGTTAACGAGTTCCACGTTTACCTGACCAAGAACGGCCGAATTTCCATGGCTGGTCTTAA
CACACACAACGTCGCTTACGTCGCCAAGGCCTTTGATGCCGTCGTTCGAGGTTAATTATG
TATTTGGAGTAGGATAGATTTAATATCATGTTTAGATGTCTTATTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29337g_CDS-001

Protein length: 432 aa.
Product: Cytosolic aspartate aminotransferase involved in nitrogen metabolism, putative

>YALI0F29337g_CDS-001 MSYFASVPAAPADALFGLMAKYKADTFDKKVDLGVGAYRDNTGKPWVLPVVSKVDSLIVA
DPTANHEYLPITGLPDFTKSAAKLILGPDSPAIKENRVASCQTISGTGANHLGSLFLSRF
PSSAAPPKSVFLSRSPPSPGATGDTPPRAAGGRIWISNPTWANHKQIFENVGLTVKQYPY
WDPKTLGLDLKGMLNALENETRPGDIVLLHACAHNPTGVDPAREEWEKIAAVCKSKKLFP
FFDSAYQGFASGDLERDAWAVQYFVSQGLELLICQSFAKNFGLYGQRAGCLHFITQTAKA
SENVKSQLAFLQRSEISNPPIYGARIVARVLNNPELFNEWKENLLEMANRIKSMRDALKS
ELIKLDTPGNWDHITNQIGMFSFTGLSPQQVDRLVNEFHVYLTKNGRISMAGLNTHNVAY
VAKAFDAVVRG*

YALI0F29337g_CDS-002

Protein length: 432 aa.
Product: Cytosolic aspartate aminotransferase involved in nitrogen metabolism, putative

>YALI0F29337g_CDS-002 MSYFASVPAAPADALFGLMAKYKADTFDKKVDLGVGAYRDNTGKPWVLPVVSKVDSLIVA
DPTANHEYLPITGLPDFTKSAAKLILGPDSPAIKENRVASCQTISGTGANHLGSLFLSRF
PSSAAPPKSVFLSRSPPSPGATGDTPPRAAGGRIWISNPTWANHKQIFENVGLTVKQYPY
WDPKTLGLDLKGMLNALENETRPGDIVLLHACAHNPTGVDPAREEWEKIAAVCKSKKLFP
FFDSAYQGFASGDLERDAWAVQYFVSQGLELLICQSFAKNFGLYGQRAGCLHFITQTAKA
SENVKSQLAFLQRSEISNPPIYGARIVARVLNNPELFNEWKENLLEMANRIKSMRDALKS
ELIKLDTPGNWDHITNQIGMFSFTGLSPQQVDRLVNEFHVYLTKNGRISMAGLNTHNVAY
VAKAFDAVVRG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG