YALI0F28589g

Overview

Description similar to uniprot|A5ABS8 Aspergillus niger CAIB/BAIF family enzyme
Locus type CDS
Locus tag YALI0F28589g

Location

Species Yarrowia lipolytica Positions 3631492..3632888
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1397 (nuc.)
Previous locus YALI0F28567g Next locus YALI0F2860Ot

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28589g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28589gYALI0F28589g_mRNA-001YALI0F28589g_CDS-001

Nucleotide sequence

 

>YALI0F28589g
ATGGAAGTATTCAATGACATTGCAAACCGTTTCAAACTACCGCAGAACAAAGTCAAGCTG
ATTGGAGACCAATATTCTGGTCCTCCATCTTCTTTCAGGATTGCCACGCTGGCACAGGGC
CTGATAGCTGCAGTAGCTGCAGTGTCGCTGGAGTTGATGTCTACAGAGAACAAGGTCGCA
ACTGTAGACACCTTACACAGTGTTGCAGAGTTCCATAGTGAACAACTACTTACCTGTGAT
GGAAAGAAGATTCCCTCCTCATCGCTATATCCAATTGGAGGACATCATAAGACGAGAGAT
GGGTGGGTCAGAATCCATGATGGATACACCCACCACATTAAGGGAAGCTACGAGCTAGCA
ACAGGAAAAGAAATGGTCTCCAGAGACCCGAAAGTATTGAAAGCAGAACTCGCTGATGCG
TTGCTTAAATGGAAGGCAGTGGACTTCGAGACAGAAGCAGCTAAACGTCGTCTTCCCGTT
TCAGCTGTGAGAAGCTACAGTGAGTGGGACGAGGATAAAAATGTGGACTTACTTGATTTC
CCTGTAACAATCACCAAGACAGGAGACTCTTCTGTGATACCGTTGAATGGTCCACTTGCT
TTGTCAGGTGAGAAGGTATTGGAACTCAACAGAGTAATTGCTGCCCCAGTTTGCGGTAAA
GTACTGGCTGCCCATGGTGCAGACAACACGTGGGTCACGTCCCCCAATCTTCCCACAGCA
CCAGAATTGGATGTCGAGTTCACCAAGGGTAAAAGAAGAGTGAATTTGGACTTGGAGAAT
GAAGAAGATATGAAGACACTCTGGGATATGATCGAGGAGACGGACATGTTCATACAATCA
TATGCACCTGGGTCGCTGGAGAAACGTCTAGGTTTACCACTCAAGGATATTCATACAAGA
AACAAGAGCATTATCGTGGGAACTCTGAGTGCATATGGACTTGGAGAATGGCATGACAAG
AAAGGGTTCGATTCGCTGGTGCAGGCAGCTTCTGGAATGAATGTATCAGAGGGAGAATAC
TTTGGACTGGATCTAGGTGTGCCTAAACCATGTCCTTGCCAAGTGCTTGACCATGCCGCA
GGTTACTTTTTGGCTCTGGGGCTTATGATCTCCCGGTTAAGACAAACACATGAAGGTGGT
TCTTACATGGTAGAGGTGTCTTTAGCTGGAGTGATGGCCTACCTCAGGAAGCTGGGACAG
TCCGCAGATTACATCGATGCTCCAGTTCTCACCAGCGAACTGCTCCAGGGCACCGATATT
CTTCAAGAAGAGGACTCCCAGTTTGGGAACCTGTCGTTTGTTTCTCATCCCATCAGGATC
GGCGGTGTGGAATTGAACTGGAATATGTCTAAGTGGGATTCCTAGTACTGTAGTAAACTG
AGTGCAATTGCTCTGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28589g_CDS-001

Protein length: 455 aa.
Product: CAIB/BAIF family enzyme, putative

>YALI0F28589g_CDS-001 MEVFNDIANRFKLPQNKVKLIGDQYSGPPSSFRIATLAQGLIAAVAAVSLELMSTENKVA
TVDTLHSVAEFHSEQLLTCDGKKIPSSSLYPIGGHHKTRDGWVRIHDGYTHHIKGSYELA
TGKEMVSRDPKVLKAELADALLKWKAVDFETEAAKRRLPVSAVRSYSEWDEDKNVDLLDF
PVTITKTGDSSVIPLNGPLALSGEKVLELNRVIAAPVCGKVLAAHGADNTWVTSPNLPTA
PELDVEFTKGKRRVNLDLENEEDMKTLWDMIEETDMFIQSYAPGSLEKRLGLPLKDIHTR
NKSIIVGTLSAYGLGEWHDKKGFDSLVQAASGMNVSEGEYFGLDLGVPKPCPCQVLDHAA
GYFLALGLMISRLRQTHEGGSYMVEVSLAGVMAYLRKLGQSADYIDAPVLTSELLQGTDI
LQEEDSQFGNLSFVSHPIRIGGVELNWNMSKWDS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG