YALI0F28413g

Overview

Description similar to uniprot|P40016 Saccharomyces cerevisiae YER021w SUN2 26S proteasome regulatory subunit
Locus type CDS
Locus tag YALI0F28413g

Location

Species Yarrowia lipolytica Positions 3614029..3615517
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1489 (nuc.)
Previous locus YALI0F28391g Next locus YALI0F28435g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28413g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28413gYALI0F28413g_mRNA-001YALI0F28413g_CDS-001

Nucleotide sequence

 

>YALI0F28413g
ATGACCACAGACCACCCTGTTTTGGCTGAAATCAAGCAATCCTTCGCCTTTCTGGAGAAG
GCCGTCGCCTCCTTCGACCAGCGATTCGTCCTGCGAGTCCTACGAGGTCTGCCTGCTCTA
CGAAAAAAGCTCACTCCAGAATTGCTGGCACAAATCGCCGTCATGACCTACCCTGCTGGC
GATGAGCGAAGAAGCGGGTTTGTTGCTCTGGCTGGAGTCAACCCCAACACCGACGAAATG
GAGGTTGATGGAGCCTCTGGCGCCACTGAGGCCACCACCCAGCCTCTACCAGAGATCGAC
ATGTACGTTTCACTGCTGTTCCAGGCCTGGCTGCTCCACGAGAACCGAATTGACGACTTG
CGGAAACTCAGCGAGCACGTGGTGGCTAGATTGAGAACCTATAACCGACGATCGCTCGAC
TACCTTGCCTCCAAGATCTGGTTCTACCTGTGTCGAGGTGAGGAGCTCAGTGGCAACCTC
GAGGCTGTCCGACCCATCCTGCTGGCATCTCTGCGAACTGCCTCTCTCCGACATGACCCC
GAGACTGAGGCCTCGCTGATCACCCTGCTGCTGCGAAACTACCTGCTCTGTGCACATGTG
ACCCAGGCCTCTAACCTCGTGTCCAAGGTCAACTTCCCCGAAAACGCCGCCAACGCTCTG
GCCGCTCGTTACATGTACTATCTGTCCAAAATCAGAGCAATCGAGCTTGACTACACAGCT
GCCCACGCCCACATCACTGGAGCCATCCGAAAGGCGCCTCAGACCCCTCTGGCTGCCGGC
TTCCTGCAAGCCGCACAAAAACTCAACATTGTGATCGAACTGCTGATGGGCGACATTCCC
GAACGAAGCGTGTTCAAGAGCGGACGGGAGCAGAGCCTCAAGGCTTACTTCGAGGTGGTC
AAGGCTGTGCGAGTCGGTGATCTCAACCAGTTTGCTGACACAATCAAAAAGTATGCATCC
GTGTTCAAGGCCGATGGTACCTACTCCCTGGTTCTGCGTCTGCGACAGAATGTCATCAAG
ACCGGTATCAGAATCATGTCTCTGGCATATTCACGAATCTCTCTTAAGGATATTTGTATC
CGTCTGAGACTCGAGTCGGAGGAGTCTGCAGAGTACATTGTGGCCAAGGCCATTCGAGAT
GGTGTCATTGAAGCCACCATCGACTCGGAGCGAGGATTCATGCAATCTAAGGAGGTGCTG
GACGTGTACTCTACTAACGAGCCTCAGCAGACCTTCCACGACCGAATTGCCTTCTGCATC
GGTCTCCACAACGACAGTGTGAAGGCCATGCGGTACCCCATGAACTCCAACCGAATTGAT
CTGAAGAATGCTGACGAGGCTCGTGAGCGAGAGCGGGAGCTGGTCAAGGAGATTGAGGAG
GGCGAGTTGGACGACGATGACGACGAGGATTTTGATCTTTAGATAGGCTAGCATATGATT
TTAGAATGTCCACCATTGTAGGTAATGTGTTACGAAATTGTAATTGGGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28413g_CDS-001

Protein length: 474 aa.
Product: Non-ATPase regulatory subunit of the 26S proteasome lid, putative

>YALI0F28413g_CDS-001 MTTDHPVLAEIKQSFAFLEKAVASFDQRFVLRVLRGLPALRKKLTPELLAQIAVMTYPAG
DERRSGFVALAGVNPNTDEMEVDGASGATEATTQPLPEIDMYVSLLFQAWLLHENRIDDL
RKLSEHVVARLRTYNRRSLDYLASKIWFYLCRGEELSGNLEAVRPILLASLRTASLRHDP
ETEASLITLLLRNYLLCAHVTQASNLVSKVNFPENAANALAARYMYYLSKIRAIELDYTA
AHAHITGAIRKAPQTPLAAGFLQAAQKLNIVIELLMGDIPERSVFKSGREQSLKAYFEVV
KAVRVGDLNQFADTIKKYASVFKADGTYSLVLRLRQNVIKTGIRIMSLAYSRISLKDICI
RLRLESEESAEYIVAKAIRDGVIEATIDSERGFMQSKEVLDVYSTNEPQQTFHDRIAFCI
GLHNDSVKAMRYPMNSNRIDLKNADEARERERELVKEIEEGELDDDDDEDFDL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG