YALI0F28105g

Overview

Description weakly similar to uniprot|B6Q228 Talaromyces marneffei putative JmjC domain protein
Locus type CDS
Locus tag YALI0F28105g

Location

Species Yarrowia lipolytica Positions 3578471..3579271
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 801 (nuc.)
Previous locus YALI0F28083g Next locus YALI0F28127g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28105g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28105gYALI0F28105g_mRNA-001YALI0F28105g_CDS-001

Nucleotide sequence

 

>YALI0F28105g
ATGGACCGCCGTCTACGTCCTTTGTTTCCCAGCCTGCGCCGAGGAATCCAAACTCTGGCC
ACTGGTATCACTCCCGCTCAACTTCCGACCTACTACAATGCCTCCAAGCCGTGTTTACTG
GACTTCTCCAGCCTTCACAAGCTGAAAGCCAACGAGAAATGGGCCACAGATGGACGCATC
AATAACGAGTACTTCGAGAGCATTATAACCAAGGATGGCGTGGATCCTGCCGTTGGGGTA
GAAAAGGGACGCATGGACCGAGATGCAGTTGAATCCGGAGGCGAAAGCAGCGACTTTCAA
CGGTTTGAAATGCCTCTCAGTTTCTTCTTGCAGTGCATCAACCATGAAGTGCCCCAGTTT
CGAGACCTGTATCTCGCCCAGACATACTTAACGGACTCGCTTCCAAGTCTCAAGGACGAT
CTCAGTCCCAACCCGTTCCTTGAGAACGCTTCTGTTGAAGCAATTGGATTCTGGATCGGT
CGAAACACCTTCACCCCTCCTCATTATGATCCCAGTGGAAACATCTATATGATGGTGCTG
GGAAGCAAAAAGGTGCGTCTGTGGAAACCTCAGGAGAAGAATCCGCTTGGAACCGCCAAA
CTGGGCTCCAATTTCAATTTCCAGACTGGCAAGCCCGACTACGAGGTTACTCTGGAACCA
GGTCAGGTTCTGTTCACCCCCCAAGGGTGGTTCCATGAACTTGAGAGCAAGGGACTCAGT
GCTGCTGTCAACTGGTGGTTCAGACTGAATAGCTCGACCTAAGTTAATTGCATATAGATT
TATAGACCCCTGGCACAGCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28105g_CDS-001

Protein length: 254 aa.
Product: Conserved hypothetical protein

>YALI0F28105g_CDS-001 MDRRLRPLFPSLRRGIQTLATGITPAQLPTYYNASKPCLLDFSSLHKLKANEKWATDGRI
NNEYFESIITKDGVDPAVGVEKGRMDRDAVESGGESSDFQRFEMPLSFFLQCINHEVPQF
RDLYLAQTYLTDSLPSLKDDLSPNPFLENASVEAIGFWIGRNTFTPPHYDPSGNIYMMVL
GSKKVRLWKPQEKNPLGTAKLGSNFNFQTGKPDYEVTLEPGQVLFTPQGWFHELESKGLS
AAVNWWFRLNSST*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG