YALI0F28017g

Overview

Description similar to uniprot|F9X8P6 Zymoseptoria tritici putative major facilitator superfamily transporter
Locus type CDS
Locus tag YALI0F28017g

Location

Species Yarrowia lipolytica Positions 3569815..3571670
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1856 (nuc.)
Previous locus YALI0F27995g Next locus YALI0F28039g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F28017g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F28017gYALI0F28017g_mRNA-001YALI0F28017g_CDS-001

Nucleotide sequence

 

>YALI0F28017g
ATGGGTGCCAAAGACGAAACAATCAGTCCAACGACATTCTCAAACCTGTCTGATTCCAGC
AATACTCGCTCGGGGACCGACAACAGCCCCGAAAATGACATTATAGACGGGGCACACGAA
AAGGATGCCGCAACTACAGATGTAACACCGGATACAGATGCAGTAGCACGTCCTACAGGC
CCTCCACCGATCTCCAACGCCAAAAAGGGTCTTATTGCCGGTCTGCTATCTCTTTCCGTG
CTTATTGTTGCTCTAGATCAGACTATTGTGACTACATCCCTACCCGACATTGTGGCCGCT
CTCAAATCGTCGTCAGGATACTCCTGGGTCGGTGCAGCATATACCCTGGCGTGTGCCGGT
GTGTTGCCTGCTTACGGTCGATTTGCAGATATCTTTGGACGAAAAATCACCCTCATGGTG
GCCATTTTACTATTTATTTTGGGCTCGGGAATCTGTGGAGGTGCCAGCTCGATCAACATG
TTGATTGGAGGCAGAGTGGTGCAGGGACTCGGAGGAGGAGGCATTTCGGCACTAGTCAAC
ATCATCATCTCTGATATAGTGGCACTGCATCAACGAGGAGCGTTCATGGGCATGTTGGGA
GCCACCTGGGCTATTGGAGGAGCCATTGGGCCGTTGATTGGAGGAGCTCTAACCCAAAAT
GTCAGTTGGCGGTGGTGTTTCTACCTGAACCTACCTATTGCCGGCTTCACCATGTGCATG
CTATTCCTTCTACTGAAGAACAACAAGGGTTTGGAGTACGAGAATGATACTCGAACTGTG
TGGCAGAAGCTCTTAAAGATTGACTTCTGTGGTATCATTCTTGTTGCTGGAGCCACTGTT
TTACTTCTTCTGGCCCTTGATTGGGGAGGAACTACCCACCCTTGGGGGTCAGGCATCATT
ATCGCCTTTCTGGTGGTTGCCTTCGTGCTCTACGGCATCTTTCTTACTCTGGAGTGGTTT
CAGGACCAACGGGAAAACTACCCTCGACCAATCATGCCTCCCAGCTTGTTTGCCAACAAG
ACCCGACTTGGAGGCTACCTCTTTACCTTCTTCCACTCCATTGTTTTCATGTGCATTTCT
TACTTCATGCCCTTCATGTACCAGTCCGTCTACGGCAAGAGCCCCATGGGTTCGGCAGTC
TACTTGCTTCCACAGGCCTTTGTCACCGGTGGACTATCTGCTGGAGCAGGTATCTTCATT
GCAAAAACGGGCCATTATCTGCCTGTCATGTGGATCTCCAGTGTTATTATCATCGTCTTT
ACTGGAATGCTGAGCACTCTGGACGAGACCTCCAACGTTGGCAAGCGAATCTGTTACGTA
ATGGCTTGGGGTGCTGGTATTGGACCTGTTTTCCAGGCACCTCTAGTGGTCATTCACACC
CAGGTTGAACGTAAGAACATTGCCATTAGTACCACAACCTGGAGTTTTGTGCGTATGCTG
GGCATGTCCATTGGTATTTCCATTGGAGGTGTGGTGTTCCAGAACCAGATGGAGGACCAG
ATCAGTGACCCGGCCATCATCCGGCAGCTTCCCGAGTGGCTCCTGGAACCTCTGTCGGGA
ACCAATGCTGCTGCTGCTACCCAGATGCTCAACAATAAAGGGTCAGATATCAGTGCCCAT
GTGCTCAGTCTGGTGCGATACATGTACTCGCATGCATTCAAGTACGTCTTTTACACCTGT
CTGGGTCTCTGTGGAGGTTTGTTGAGTGTGTTGTTGATTGGTAAGCACCAGGTCAAGATG
AGAGGCGATCTGGGCAAGAAGGAAAAGCAGGAAAAGAGAGAAGCCGAGAACCGGGCGCTG
TCAGAACAGCCGGGAGAATCAGTTTAAAATTAATGAATAATGACTAATGACTATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F28017g_CDS-001

Protein length: 609 aa.
Product: Major facilitator superfamily transporter, putative

>YALI0F28017g_CDS-001 MGAKDETISPTTFSNLSDSSNTRSGTDNSPENDIIDGAHEKDAATTDVTPDTDAVARPTG
PPPISNAKKGLIAGLLSLSVLIVALDQTIVTTSLPDIVAALKSSSGYSWVGAAYTLACAG
VLPAYGRFADIFGRKITLMVAILLFILGSGICGGASSINMLIGGRVVQGLGGGGISALVN
IIISDIVALHQRGAFMGMLGATWAIGGAIGPLIGGALTQNVSWRWCFYLNLPIAGFTMCM
LFLLLKNNKGLEYENDTRTVWQKLLKIDFCGIILVAGATVLLLLALDWGGTTHPWGSGII
IAFLVVAFVLYGIFLTLEWFQDQRENYPRPIMPPSLFANKTRLGGYLFTFFHSIVFMCIS
YFMPFMYQSVYGKSPMGSAVYLLPQAFVTGGLSAGAGIFIAKTGHYLPVMWISSVIIIVF
TGMLSTLDETSNVGKRICYVMAWGAGIGPVFQAPLVVIHTQVERKNIAISTTTWSFVRML
GMSIGISIGGVVFQNQMEDQISDPAIIRQLPEWLLEPLSGTNAAAATQMLNNKGSDISAH
VLSLVRYMYSHAFKYVFYTCLGLCGGLLSVLLIGKHQVKMRGDLGKKEKQEKREAENRAL
SEQPGESV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG