YALI0F27951g

Overview

Description similar to uniprot|Q04773 Saccharomyces cerevisiae YMR074c unknown function
Locus type CDS
Locus tag YALI0F27951g

Location

Species Yarrowia lipolytica Positions 3560857..3561589
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 733 (nuc.)
Previous locus YALI0F27929g Next locus YALI0F27973g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27951g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27951gYALI0F27951g_mRNA-001YALI0F27951g_CDS-001

Nucleotide sequence

 

>YALI0F27951g
ATGGATAACGACGAGTTGGAAGCCATCAGACAGGCTCGAATGGCCGAGCTGCAGAAGAGC
CAAGGAGGAGCTCCCGGAGGAGGGCAGGGCATGCCTCAGATGGGAGGACGACCAGGAGGT
GCCGGAGGGGCAGGAGGAGCTGAGGATGAAGGTCGAGTTGCTATTGTGAGTATGATGAGG
AGTGTTCAGAATGCATTCTAAAAGTGGTGGAGAGTTGGAGGGCTTATGAGAATGCCTGAC
ACGCTCTGTATAAGAGCGTATTTTCGAACATTCTGGAAGATCAGAGGCAGGACGTGTGGT
ACCAAGAGAAGCTTGGGATGGCCACACGAGCTATCGCAACATCTGGTCGTCTCTGAACAA
CTATTAGTTACACTTGTTATTCAGTTAACTGTGTTTTTGGTGTCCGTTCGTTACATATGG
CCACTCACTACCCATACTAACCCAGCTCTCACAAATTCTCACAGCCAACGCACGAGAACG
ACTCTCGCGGATCCGAATCGTGCGACAAGACAGAGCTCGGCAGGTTGAAGACATGCTGAT
AAGACTGGCTCAGACTGGCCAGATCCGAAAGAAGGTCGAGGAGGAGGAACTGGTGAGTTT
GCTGGGTCAGATTAGTAAGCAGGACCAGAAGACTACCGGCAACAACAAGATCATCATCAA
TCGGAGAGAGTTGGACGACGACGATGATGACTTTTTCGATTAGCGTGCATAGTTAATACA
TGGGATGGATTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27951g_CDS-001

Protein length: 141 aa.
Product: Protein with homology to human PDCD5, putative

>YALI0F27951g_CDS-001 MDNDELEAIRQARMAELQKSQGGAPGGGQGMPQMGGRPGGAGGAGGAEDEGRVAILSQIL
TANARERLSRIRIVRQDRARQVEDMLIRLAQTGQIRKKVEEEELVSLLGQISKQDQKTTG
NNKIIINRRELDDDDDDFFD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG