YALI0F27819g

Overview

Description some similarities with uniprot|Q9USY5 Schizosaccharomyces pombe Putative centromere associated protein
Locus type CDS
Locus tag YALI0F27819g

Location

Species Yarrowia lipolytica Positions 3544984..3547593
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2610 (nuc.)
Previous locus YALI0F27797g Next locus YALI0F27841g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27819g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27819gYALI0F27819g_mRNA-001YALI0F27819g_CDS-001

Nucleotide sequence

 

>YALI0F27819g
ATGTTGAAACGAGAACGGGGAAAGACACCTTTTTCGATAGGCGACGGTCTCACCGGCCGA
CGGACTGGTGTAACAGTTGAGGATACCGGAGAACGGGACGAAAATGGAATGGAAAAGATC
GACAATATATACCAGGAATCGGCTGACGAAGACTCCGAAGAGGAAAAGCCTCTCAAGGGA
AGTCATGCCATGAGTGATTTCAAGGTACAGCGAGACGACAGTGACGATGAGCAAGCGAGT
CACGTGAGCCTACCTCCTCAGACGCTTACTCGGCCCCCAAAGACCAAAATTCAAGCTATC
GGGCTTAACGATGTGACACAACGGGCTACCAATCAGTTACCAAAACAGACAACAAAACAG
ACAACAACACCAGCTAGAGGAACTACCCTCAAAGCCCCATCATCTGCCCGTAGACTGAAA
ATTGTATCGGCGGTGCCTGTTTCCAAAGTGGTTTCTAAACCCAGTACATCCTCCAAGGCT
TCTTCTTTCGATTCGAAACCAGCAACACAGTCTTCCTCTACAGCACCAAAGATCACCAAA
GTGTCGGCAATCAAGTCGATTCAGCCCGTGCCTGCTCAGAAACTACCAGCACCACAACCA
AAACAGCGACAACCATCGCCTGATGATACTGTTGACTCACTAGACATGTCTCCGGCACCA
TACAACAACCCATACGTGGCCCCTCCCACCAAGTTTGTACCCAAGACGTTTTCTAGCACA
AAACCATTCACAGCAACCGACTCGGTTTTCAAGACGCCTGCTCGAGCCAACAGTCTCTAT
GGCGACTCCCCTGCGGACTCGACGCCAGGAGTTCCTACACCAGCCTTCAAGCCTGCCCAG
TTCAATCCTGGAACATTCCAGTTTGGAGGAGCAAAGGACGTGTTTGATATCCCTGAGGAT
GAACCAATAAATATGGGCATGGATATAGACATGGGCATGGATATGAGCATGGATATGGAT
GTGCATGACGAAAGTATTGGATATTCCAGCCCCAAGAATGAAATCAAGGGAGTTAGACCT
GCGGATGTTTTCAATTCTCCAAACGTTCCCAATTCGAGAGACTCCAGAGGAAGCCTTTTC
GGCTCTCCTGATGTGCCTAAACCTCTACCCAAGCCTAAGGCAAAATCGAAAGAGCCTAAG
AAGAAGCCAGCCAAGGAGAGAAAGCCGAGCTTTGCCGAAAAGTATAAACCCAGGGACTTC
TCCAAAGCCAACGACGACCTCTTCAAGCCGTTCAAGGTCCCCTCCAAGACGGTGTCTTCA
AAAACCGTCACTTCCAAGCCGGCTTCTCGTGTTGAAGATGATTCCATAGAAGCTATGAGT
GATAACGACTCGAATGCTATGGACTTCACTAGCATCGTTAAGCACAGTGGCCCTGGAAGT
TTTGTCAATGGCAAGTCATCCAAGTCTAAGGATACTAAGACGCACAAGCCGAACACTTCT
GTTGATTCTCTTGACTTTGATCTTAGTGGAACTGATGACATTGGTGGCGGTGACTACGAC
ATTTCTATGGGTGGTGATGACGACGTGGCTACAAACGGTGGCAATGGCTCGTTAGGTGAG
GACGATTCTATTTCATCAACTCCCAGGCATTTCGATCGCTCAATCAACTACCGGGAGATC
TCTACTGTCGATGACTCCAGGATGGACTATGAGGAGGACTCTGACGACGACTACTATGAC
CAGTCGTACAGAATGGAGGATGATGGGGATGATGATGATGATGATGATGATGATGACGAA
TACAACTCTGCTGTGGACGAAACCATGAATCATGGCAGAGGTGTTCTTCCTTCTCCTCCC
CGTTCTCTCCGACGTCATCGACCGAAACGAAATGTAGGACGTCCGGTGAGGTATTGGATG
GGAGAGGGAATCCAGTACAAGTTGGAAAAAAGCGAAGCTGGAGGATTTGTGCCTGTTGTC
AAGAGTGTTACTAGGTTGCCTGATAATGAAGAGGCAGCAGAGAGAACGAAACGCAAGAGA
AGAAAGGCCTATGATGTTGACGATGCTATTGCAGAGGCTGATGCCGATGCGAACGAAAAT
ACCAACGATAATAATGGCGTCGTTACTAATTGGCAGAAGAAAAAATCAGTTGAAGTTGAG
GTTTTCAACTACACCGCTGAAGAAGGTGATCCTGAAACGCACATGGAAACCGTGGCTTAT
AGTCACGATGGATGTGATTACACTGATCCCAGTCCTGAAGGTCTTTCTGTGGCCCAGTTG
TTTGGCGACAAGAAAGATTTCACTCAATCTGGCATGGTTCGTCTGATTGGAGGAGGCCGC
AAACCCGAACGAAACTCCCGCCATCACTTGCACCACTTTTATGTGCTTTCAGGCATTGTA
GATGTCACTATTGGCGAGAAGGTGATTCGAATCAAGGCTGGGTGTCCCTTTATTATTCCT
AGAGGTACCATGTTTGCGTTGCAGAACGCTTCTGAAACCATTGAGGCGCTACTCTTCTAT
GTCCGATCCCATGATACTCTTCTGAGGTACGAGGAGAGAGTTGCACAAGCAGAGATGGAT
GGGGTGAATGAGACAGGAGAAGGTGAGGGTGTTCAGGACTGAAACTATTTATAACTAACT
GTATTTTTAATATGACTCAACCAATGGCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27819g_CDS-001

Protein length: 854 aa.
Product: Conserved hypothetical protein

>YALI0F27819g_CDS-001 MLKRERGKTPFSIGDGLTGRRTGVTVEDTGERDENGMEKIDNIYQESADEDSEEEKPLKG
SHAMSDFKVQRDDSDDEQASHVSLPPQTLTRPPKTKIQAIGLNDVTQRATNQLPKQTTKQ
TTTPARGTTLKAPSSARRLKIVSAVPVSKVVSKPSTSSKASSFDSKPATQSSSTAPKITK
VSAIKSIQPVPAQKLPAPQPKQRQPSPDDTVDSLDMSPAPYNNPYVAPPTKFVPKTFSST
KPFTATDSVFKTPARANSLYGDSPADSTPGVPTPAFKPAQFNPGTFQFGGAKDVFDIPED
EPINMGMDIDMGMDMSMDMDVHDESIGYSSPKNEIKGVRPADVFNSPNVPNSRDSRGSLF
GSPDVPKPLPKPKAKSKEPKKKPAKERKPSFAEKYKPRDFSKANDDLFKPFKVPSKTVSS
KTVTSKPASRVEDDSIEAMSDNDSNAMDFTSIVKHSGPGSFVNGKSSKSKDTKTHKPNTS
VDSLDFDLSGTDDIGGGDYDISMGGDDDVATNGGNGSLGEDDSISSTPRHFDRSINYREI
STVDDSRMDYEEDSDDDYYDQSYRMEDDGDDDDDDDDDDEYNSAVDETMNHGRGVLPSPP
RSLRRHRPKRNVGRPVRYWMGEGIQYKLEKSEAGGFVPVVKSVTRLPDNEEAAERTKRKR
RKAYDVDDAIAEADADANENTNDNNGVVTNWQKKKSVEVEVFNYTAEEGDPETHMETVAY
SHDGCDYTDPSPEGLSVAQLFGDKKDFTQSGMVRLIGGGRKPERNSRHHLHHFYVLSGIV
DVTIGEKVIRIKAGCPFIIPRGTMFALQNASETIEALLFYVRSHDTLLRYEERVAQAEMD
GVNETGEGEGVQD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG