YALI0F26961g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F26961g

Location

Species Yarrowia lipolytica Positions 3430285..3431268
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 984 (nuc.)
Previous locus YALI0F26941r Next locus YALI0F26983g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26961g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26961gYALI0F26961g_mRNA-001YALI0F26961g_CDS-001

Nucleotide sequence

 

>YALI0F26961g
ATGATCATTCCGATAGCTGCTGCGCTGTGCGTATCTGCCCTCTTATGTGGGTATGGAGGA
AAACAGCTGGAAGCATATGTGGTCAAGAACTGTGGGGACTCCAGCGATGTCCTCCCGTTG
TGCCCCATTACTCAGACGGTGACTATTGCTAGAGACGAGCTCAGCAAGAAGTTGTGGTAT
GTGTTTCATTGTGGAGAACGACTGTTCAGCTTCGAGAAGAAAAGGGGCACGTGGGCCCTG
ATAGACAATCGCAGGAATGTGGTCGCTGAGCTAGGAATGAGGTTCTCCAAGTACATCCAC
TTTGTGAGAAACGAGAGAGAAGGCAACAAGAAACTGGTATACCGTGCTCTGAGTGCCAAT
ACCTGGCCTTATCCGTCGTTGTCCTTCAAGTATATGGACCTGGTATCTCTCTACGTCTGG
GGAAAGGAGTCCCAGTATCTTGAACGACATCACCGAATTGATGGACAGCAAATGTTGACA
AGAGAACGAATTGCAAAGGTAGAGCGTCTCGACTACACAAAATTCCGTCTAAGCTTCGAT
CAGAAGAAGATTGACCCCCAACTGGTCGTTTGTACTGCCTTCGCAGCCATTCTGACGCTG
TGGAAGAACCATAAGATGCACTACAAGAAGGAGCACGCTTCGCAGAAAATTAAGAGAGCC
AAAAGGAAACCTTTCAACAAAATGATAATCAAACTGCATCGGTCAAGAATGACCAAGACA
TCATTAGCAAACTCGCACAAGTACTCCCGTGCCAAGTCCAAGAAGTTAGTCAAGGGGAAC
ATCAAACAGGTGTTGAAGACGAACGAAGCTCTCATGGGTACCACCACAGGTGTTGTCAAG
AACGCCGCTACTATAGGCAGTGTTGTTGTTCCTGTTCAGTACCAACTTCGTAAACGTATG
GTTGTGAAACAACATGCTCGCAGGGTAGGAGGAAGACCCAAGACTGTGATGAAAAGAAAC
AGGCCCAAGGCTAGAGTTAGGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26961g_CDS-001

Protein length: 328 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F26961g_CDS-001 MIIPIAAALCVSALLCGYGGKQLEAYVVKNCGDSSDVLPLCPITQTVTIARDELSKKLWY
VFHCGERLFSFEKKRGTWALIDNRRNVVAELGMRFSKYIHFVRNEREGNKKLVYRALSAN
TWPYPSLSFKYMDLVSLYVWGKESQYLERHHRIDGQQMLTRERIAKVERLDYTKFRLSFD
QKKIDPQLVVCTAFAAILTLWKNHKMHYKKEHASQKIKRAKRKPFNKMIIKLHRSRMTKT
SLANSHKYSRAKSKKLVKGNIKQVLKTNEALMGTTTGVVKNAATIGSVVVPVQYQLRKRM
VVKQHARRVGGRPKTVMKRNRPKARVR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG