YALI0F26477g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F26477g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3388959..3390170
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1212 (nuc.)
Previous locus YALI0F26455g Next locus YALI0F26499g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26477g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26477gYALI0F26477g_mRNA-001YALI0F26477g_CDS-001

Nucleotide sequence

 

>YALI0F26477g
ATGCTATTATTTGAGCTGTTCGAGGTATCTCAAACGGTGCAAACGGTGCAATTGGAGCAG
GAGTTCCGAAATCGCCTGGTTGATTGGAGCCACAGTGTCGCGAGTTTATGTGCTTTAAGT
ATTGGCTATCAAATCCTCAGTAACCCTCAATCACGCGAAAGGTACATTGAATTGGGCGAC
GAGGGTGCGTCCGAGCTGGTAGATCAGATTGACGACCCGTTGAACTTCCTCGAATCATGC
TTCTACGGCTTTTATCGACCGCAAATCGTCGATCCAGTGCCATTACTCAAGGTGCTACAG
GACCACAAGAAGGAAAGCACCAGGGCGGTGTTCTCAGGGACGCAAGATATTCTGGAAAAG
TTCTAAATTACAAAGTCACAAAAGTCCAAGGACTTTGGAATCCTCGAATGGTGGACAGAC
ATGCTTAATGTTGATCCCGAGGGGGACGGAGAAGCAGTATCAAAGGACAAAGAGTGGATC
GCAAGAGAGCAGGAAAGACAAGAGACAGATAAGTCAGAATTCAAGGGGTTTTCGGAAAAA
TTCATTCCTCACTTGGAAAACCAGCTCTCGGGCCTATTACAGAATGAAGCCTTTGTTTGG
GAGACTATACGAACTCTAGGATACGGCCTGATGCTGGAAAGTCATAGACTGCAACACTTG
AAGAAGATTCTGTTCGTTACCCACTGTGAACCTCCTAGAAGGTACTGGAGCCTGCTACAC
GCCTCTCTCGTCAGACTGCGAAGAACAGCCCTTTACTGGGAGACTAAAAAGATTTCAGCT
AATGATAGTGTCAATATGGCGCTCACTAGAGCAGTATACGAGAGTCTGCTGTTGCTACTG
GAGAACCTATCGAAATTGGTGAAACATCTCAGCTCCAAGTACTCAAAGAACCTATGCCAG
ATAGCTAACAGATTGTGGATTATTGGTCATACCATGGTTCGACAAACTAACCATCCAGGC
ATACCATACAATTCTGTCTTCAGTGATATCACTGTTAGAACAGCATATATTGAGTACTTT
TACGCCAACCGAGTGCTTTCAAAGAACTTCAAGCCGTTCCATTACTCGTTCCACACCGAC
GAGTATTATCCATTATATGTTATTGATATTGCTCTTGACACGGCAGAGCTGGAGTGGATC
TGTCCAGGCAACTTTGGAGACAGGGAGGCTGAAAAGGAGCGAATAAGAGATTGGAAGTTT
GCTCAGAAGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26477g_CDS-001

Protein length: 404 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F26477g_CDS-001 MLLFELFEVSQTVQTVQLEQEFRNRLVDWSHSVASLCALSIGYQILSNPQSRERYIELGD
EGASELVDQIDDPLNFLESCFYGFYRPQIVDPVPLLKVLQDHKKESTRAVFSGTQDILEK
F*ITKSQKSKDFGILEWWTDMLNVDPEGDGEAVSKDKEWIAREQERQETDKSEFKGFSEK
FIPHLENQLSGLLQNEAFVWETIRTLGYGLMLESHRLQHLKKILFVTHCEPPRRYWSLLH
ASLVRLRRTALYWETKKISANDSVNMALTRAVYESLLLLLENLSKLVKHLSSKYSKNLCQ
IANRLWIIGHTMVRQTNHPGIPYNSVFSDITVRTAYIEYFYANRVLSKNFKPFHYSFHTD
EYYPLYVIDIALDTAELEWICPGNFGDREAEKERIRDWKFAQK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG