YALI0F26169g

Overview

Description similar to uniprot|P36775 Saccharomyces cerevisiae YBL022c PIM1 ATP-dependent protease
Locus type CDS
Locus tag YALI0F26169g

Location

Species Yarrowia lipolytica Positions 3362656..3366232
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3577 (nuc.)
Previous locus YALI0F26156g Next locus YALI0F26191g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F26169g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F26169gYALI0F26169g_mRNA-001YALI0F26169g_CDS-001

Nucleotide sequence

 

>YALI0F26169g
ATGATTGATAACAAGGTTTCTGTATGCAGTGTTGGAAAGGTGGTTATCACTGAAGTCGCC
ACCTTTGCATCCCATCCTCTGTACATTGACAGGAAAACCGCTTTGACCATGATTAGATCA
ACGCGAGCGGCCTCTCGGCTTCGGCTAGGAGCTCGTTACTATGCGTCACACGCCCCCTAT
GGCGTGCTTTCCGAACATTTGAAGCGCACCCCTCGAACCAACTCTCAACACTACTATCCT
CCTCCTCAAGGAGCCCACGACCTTCCCAAGGTGTCCAGCATGGGAGATTCCATCGCGAGC
ATTGTTCGAGGACGAGAGTTGTGGGTCCAGGAAAAGGACAAGTCCGACAAGCCAGAGAAA
TCTGACAAGCCCGACAAGACTGATAAGACCGACAAGGACAAGCCTGAGAAACAGGACAAA
GACAAGACCGACAAGCCCGAGAAGACCAAGGTGAGCCACACCCCGTCATCCACTGCATCC
ACCGGAGCCGGAGAAGCTGCTGCTCCTCCTTCTGCGCCTCCCTCGGGCTCGGGATCATCG
TCTTCTTCTGGAGGAGGGTCTCCACCTGCCAAGAAGAAGAAGAGCCCTGCCCAGACCTAT
CCCGAGATTTTGGCGGTGCCCATCAGCGACCGGCCTCTGCTTCCTGGATTTCATCGAGCC
CTGGTCATCCGAGACCCGAACGTGATGAAGGCTATTGACGAGATGATCACCCGAGGCGAG
CCATACCTGGCATGCTTCTTCCTCAAAGAGTTTTCCAACGCAGACGTGATCCAGGACGCC
TCCGAGGTACACGACATTGGAGTTATTGCTGAGATCCAGATCCAGTCGCAGGACCACAAG
CGATCCACCGTCGACGCCTCCAACGAGCCTGTCTATGTGCTCATACTCTACCCCCACAAG
CGAGTACGACTCAACTCGCTTAAAAACCCTCCTTCCAGCGGCGGAGCTGTGTCCTATGCC
TCTGTGTCCGAAGACGTGGCTGAGGACGGAGAGCTGCTGCTGACTAGCAAGGATCTGGAG
GGGTACTCGGAGGAGTTTCTGGAGGCCCGAGAGGAAGCCAAGAAAGCTAAGAGTGGCAAG
ACTGAGGATTCCAAGCACGATTCCAAGGTTACTTCCAAGGACGGCAAGGAGACCACCGAA
AAGTACGACTCTTCAACTCTTCAGGAGTCCCCTTACTCTTTTCTGTCCACCTACGATGTG
TCTACAGCTGCCATTTCTCTAATTGAGGACAAGCCCCACGACAAGAACAACAGGGTCATC
ACTACATTGACAAATGAGATTCTCAACGTGTTCAAGATGCTGCGGGCTGAAGACGCCACT
CTTCGAGAACAGCTGTCGAGTGTCGTGGGCGATATTCTGCGAACCGAGCCTGCAGTTCTT
CAGGAGCCCGGTCGGCTGGCTGACTTTGCCGCGGCTCTGTGTGCTGGCGAAGGAAAGGAG
ATCCAGGCTGTTCTGACCGCTCTGGATCTCGAGACTCGTCTCAACCGGGCTCTGATTTTG
CTCAAGCGAGAGCATACCAATGCCAAGCTGCAGCAGAAGATTGCACGGGATGTGGAGAAC
AAGCTCAACAGCAAGCACAAAAAGTTCCTGCTGACCGAGCAGATGAAGGCCATTAAGAAG
GAACTCGGGGTTGACGACGGCAAGGAGAAGCTGGTGGAGAAGTTCAACGAGCGGGCCGAG
AAGCTGGACATGCCCGAAAACATCCAGAAGGTGTTTGAGGAGGAAATGACCCGGCTGCAA
TCCATGGAGCCCTCGTCCAGTGAGTACTCGGTGACCCGAAACTACCTGGACTGGATCACC
CAGATCCCCTGGAACAAGACGACCGAGGACCGGTTCAACCTGCCCCAGGCCAAGGATGTG
CTGGATTCCGAGCATTATGGCATGAAGGAAGTCAAGGATCGCATTTTGGAGTTTATTGCC
GTGTCGCGCATGAAGGGCGGTCTTACTGGTAAGATTCTGCTGCTGCAGGGTCCTCCCGGT
GTTGGAAAGACCTCCATTGGAAAGTCCATCGCCAAGGCACTCAATCGGCAGTTCTACCGA
TTCTCTGTCGGAGGAACTAACGATGCCTCTGAAGTCAAGGGTCATCGACGAACATACGTC
GGAGCTATCCCTGGTCGACTTGTTCAGGCTCTCAAGCAGACACAGACAGAAAATCCTCTG
ATTCTGATTGATGAGATTGACAAGCTATCGTCTTCGCGAACTCAGGGAGACCCCGGAGCT
GCTCTTCTGGAGGCTCTGGACCCCGAGCAGAACAACGCATTTCTGGACCACTACCTGGAC
GTTCCCATTGATCTGTCCAAGGTGCTGTTCGTGTGCACCTCTAACGATCTGTCTACAATC
CCCTGGCCGCTGCTGGACCGAATGGAGGTAATTGAGATGAGTGGATATGTGCCCGACGAG
AAGCTCAACATTGCCAACCAGTACCTTGTCCCCCAGTCCAAGAAGGAGACTGGTCTGGAG
AATGTTAACGTTCAGGTGACCGACGATGCCATCAATGCCCTTAACCGACAGTATTGTCGA
GAGTCTGGAGTTCGAAACCTCAAGAAGCACATCGAGAAAATTTTCCGAAAGGTGGTTGTC
AAGATCGTGGGCGAGTATGGCCAGGACGAGGTTGCTGCTGAAAAGATTATTGACGTGGAG
CCTGTGGAGAAGGATAAGGAGTCTGCTGAGAAGAAGACCACGAAGTCCAAGTCCAAGGAG
GTCAACGAGGAACCTGCTGCCAAGGAGGAGAAAGACAAGGCAACTGAATCTGCTGAGTCA
TCTGAGACCAAGGTGGGCACGAAGGCTCCTCCTGTCACGGTCCCCGAGGACTACAGCCTG
ACTATCGATGAGAAGGATTTGTATGACTATGTCAACTCTCCCCCTTACTCGTCCGACCGA
ATGTTTGAGGATCCTCCCCCTGGAGTCGTCATGGGTCTTGCCTACTCTCCTCTTGGAGGC
TCTGCTTTGTACATTGAGTGTATTCTGGATGGAGGTCTTTCTGCCGACTCATCTGCTCGA
CTCTCGTCGACTGGTAACCTGGGTAACGTCATGAAGGAGTCTACCAACATTGCTTACTCG
TTTGCGAAGTCGTTTATGATCCGAAACTTCCCTGCCAACCGGTTCTTTGAGCGAGCTGGC
ATCCATCTGCATTGTCCAGCTGGCGCCATTTCCAAGGATGGGCCATCGGCCGGATGTGCC
GTTGTGACTGGTCTGCTGTCTCTGGCTCTCAACCACCCCATTGACTCTTCCATTTCCATG
ACCGGTGAGATTTCGCTGACCGGTAAGGTGATGAAGATTGGAGGTCTCCGAGAGAAGGCT
GTTGGAGCTCACTCTGCTGGAGCCAAGACCATCATCATTCCCAAGGACAATTCTGGAGAC
TGGGACGAGCTTCCTGACACCGTCAAGGAAGGTCTTACTCCCGTGTTTGCCGGCACCTAC
CAGGATGTGTATGACGTTGTTTTCCAGGGTCTGGATACCAAGGTGGCCGCTGAGGTGTGG
AAGAAGCAATTTGATCTGATTGACCGAAAGCTCGACAAGCGAGGAAGCAAGTGAGGATGT
ATATAGTATGAATGAATAATGATTGTTTAGTTGTGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F26169g_CDS-001

Protein length: 1178 aa.
Product: ATP-dependent Lon protease, putative

>YALI0F26169g_CDS-001 MIDNKVSVCSVGKVVITEVATFASHPLYIDRKTALTMIRSTRAASRLRLGARYYASHAPY
GVLSEHLKRTPRTNSQHYYPPPQGAHDLPKVSSMGDSIASIVRGRELWVQEKDKSDKPEK
SDKPDKTDKTDKDKPEKQDKDKTDKPEKTKVSHTPSSTASTGAGEAAAPPSAPPSGSGSS
SSSGGGSPPAKKKKSPAQTYPEILAVPISDRPLLPGFHRALVIRDPNVMKAIDEMITRGE
PYLACFFLKEFSNADVIQDASEVHDIGVIAEIQIQSQDHKRSTVDASNEPVYVLILYPHK
RVRLNSLKNPPSSGGAVSYASVSEDVAEDGELLLTSKDLEGYSEEFLEAREEAKKAKSGK
TEDSKHDSKVTSKDGKETTEKYDSSTLQESPYSFLSTYDVSTAAISLIEDKPHDKNNRVI
TTLTNEILNVFKMLRAEDATLREQLSSVVGDILRTEPAVLQEPGRLADFAAALCAGEGKE
IQAVLTALDLETRLNRALILLKREHTNAKLQQKIARDVENKLNSKHKKFLLTEQMKAIKK
ELGVDDGKEKLVEKFNERAEKLDMPENIQKVFEEEMTRLQSMEPSSSEYSVTRNYLDWIT
QIPWNKTTEDRFNLPQAKDVLDSEHYGMKEVKDRILEFIAVSRMKGGLTGKILLLQGPPG
VGKTSIGKSIAKALNRQFYRFSVGGTNDASEVKGHRRTYVGAIPGRLVQALKQTQTENPL
ILIDEIDKLSSSRTQGDPGAALLEALDPEQNNAFLDHYLDVPIDLSKVLFVCTSNDLSTI
PWPLLDRMEVIEMSGYVPDEKLNIANQYLVPQSKKETGLENVNVQVTDDAINALNRQYCR
ESGVRNLKKHIEKIFRKVVVKIVGEYGQDEVAAEKIIDVEPVEKDKESAEKKTTKSKSKE
VNEEPAAKEEKDKATESAESSETKVGTKAPPVTVPEDYSLTIDEKDLYDYVNSPPYSSDR
MFEDPPPGVVMGLAYSPLGGSALYIECILDGGLSADSSARLSSTGNLGNVMKESTNIAYS
FAKSFMIRNFPANRFFERAGIHLHCPAGAISKDGPSAGCAVVTGLLSLALNHPIDSSISM
TGEISLTGKVMKIGGLREKAVGAHSAGAKTIIIPKDNSGDWDELPDTVKEGLTPVFAGTY
QDVYDVVFQGLDTKVAAEVWKKQFDLIDRKLDKRGSK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG