YALI0F25597g

Overview

Description similar to uniprot|Q8X1Y6 Schwanniomyces (Debaryomyces) occidentalis SCR1 Multidrug resistance protein
Locus type CDS
Locus tag YALI0F25597g

Location

Species Yarrowia lipolytica Positions 3291857..3293583
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1727 (nuc.)
Previous locus YALI0F25586r Next locus YALI0F25619g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25597g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25597gYALI0F25597g_mRNA-001YALI0F25597g_CDS-001

Nucleotide sequence

 

>YALI0F25597g
ATGGACACAGCCTTCGCCCAACTTCTGAATTATGTGTCAGGGGGACGATGGTTTCCCTAC
CCCGAGCAGCGTGCAGGGTTTGAGGTTCCAGCTCAATTCTGGAACGAACCAGAACCTGAA
CAACAAGAGATTGGATACGAAGATGCGTTCAACGGTATTGATTTGGAGGAAAACAGAGAC
ATTCACAACACTACTCCTTTAGATGCCTCAGCCGCTTCAACGATTGAAAAAAGGGGACAC
ACTCCAGACGCAGAGAGCCTTTCCGACGACCTGGTTGTGGGATGGTATGGCCCTGACGAT
CCAGATAACCCCCAAAACTGGTCAACTTTAAAGAAGACAACAAGCGCAGCCCAGGTCCTC
ATTCTTACCTTCTCTGTCTATGTCGGATCATCAATCTATACACCAGGACTCCCTGAGATT
ATGGAGGATTTCAATATTTCAGAGACTGCAGCACTAGTTCCAATGACAGTCTTTGTCTTT
GGATACGGACTTGGACCTGTCGTCTTCTCCCCTCTATCCGAACACCCTGTTGTTGGCCGG
CTATGGATCTACGTCATCACGCTGGCTATCTTCGTCATTTTGCAGGTCCCTACAGCACTC
AGTAAGGATATTGGTTCGTTGATCGTGCTACGCTTCCTTGGTGGCATCTTTTCATCGCCC
GCTCTGGCTATATCTGGAGCTACCTTTGGGGACATTTACGAGATCGCATACATTCCCTTC
GCTCTGGCATTCTGGGCCATTGCCGGAATTTGTGGACCTGTTTTTGGACCCGTTATTGGA
AGTATATTTGCTCAGCTTCTGAACTGGAGATGGACATTCTGGGTGCTGACAATGATTTCG
GGTCTGTGTCTCGCTGTTCTGTTTTTCTTCTTCCCTGAGACCTCTGCAGGAAACATTCTC
TACAGACGAGCTAGACGACTGGAGAAGCTGACAGGCAAGGAGTATACAACGGCTGCACGA
CAAGAATGGGCTGCCAAGAAGATGACGACAGTGGCGTACGATATTCTGCTCAGACCAATC
CTCATCACCTTCACTGAGCCAATTGTCTTTGCTCTGGGTCTGTACATTGCATTGCTCTAC
TCCACCCTCTACAGCTGGTTCGAGGCTTTCCCCATCGTCTTCAGTCAAACTCACGGTTTC
AACACCATTGAATCTGGTCTAGCATACCTCGGTCTTATCGTGGGAGGTGTTATTGGGGTG
GGATTGTACCTTCCTATCATCTACAGCAAGTTCACCCGTCCAGTGCTGAAGGGTAACTTT
CCTCCGGTAGCCATGTTCATGAAACTGTGTTTGATTGGATCCTCAATCTTCCCAGCATCC
CTGTTCTTCTTCGCCTGGACGTCTAACAAGTCTATCCACTGGATTGTTCCCATTATTGCG
TCTGGTTTGTGCATCATAGGCATGGTGTTCATCTTCCAGACTGTCTTCAACTACTTGTCA
GGCTCTTACCCCAAGTATATTGCCTCTGTCTTCGCTGGAAACAGCGTCTTCAGAGCGTTT
GTTGCTGGAGCCTTCCCTCTATTCACACATCAGATGTTTGATGCAATGGGCCCTGAGAGT
TTCCCTGTTGGATGGGGAACCACACTGATAGGCTTCGTTGGAATTCTGATGGGTGCTATC
CCCCTGGTGCTCATAAAATGGGGTGACAAGTTGAAGGGCTCTTCTCGATGGGCCTAAACA
CACATTAATATATAGAACTCAGTAATAAATAGAATGATAGAAATTCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25597g_CDS-001

Protein length: 559 aa.
Product: Multidrug resistance protein, putative

>YALI0F25597g_CDS-001 MDTAFAQLLNYVSGGRWFPYPEQRAGFEVPAQFWNEPEPEQQEIGYEDAFNGIDLEENRD
IHNTTPLDASAASTIEKRGHTPDAESLSDDLVVGWYGPDDPDNPQNWSTLKKTTSAAQVL
ILTFSVYVGSSIYTPGLPEIMEDFNISETAALVPMTVFVFGYGLGPVVFSPLSEHPVVGR
LWIYVITLAIFVILQVPTALSKDIGSLIVLRFLGGIFSSPALAISGATFGDIYEIAYIPF
ALAFWAIAGICGPVFGPVIGSIFAQLLNWRWTFWVLTMISGLCLAVLFFFFPETSAGNIL
YRRARRLEKLTGKEYTTAARQEWAAKKMTTVAYDILLRPILITFTEPIVFALGLYIALLY
STLYSWFEAFPIVFSQTHGFNTIESGLAYLGLIVGGVIGVGLYLPIIYSKFTRPVLKGNF
PPVAMFMKLCLIGSSIFPASLFFFAWTSNKSIHWIVPIIASGLCIIGMVFIFQTVFNYLS
GSYPKYIASVFAGNSVFRAFVAGAFPLFTHQMFDAMGPESFPVGWGTTLIGFVGILMGAI
PLVLIKWGDKLKGSSRWA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG