YALI0F25179g

Overview

Description weakly similar to uniprot|Q08923 Saccharomyces cerevisiae YPL181w CTI6 transcription factor binding
Locus type CDS
Locus tag YALI0F25179g

Location

Species Yarrowia lipolytica Positions 3252032..3253638
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1607 (nuc.)
Previous locus YALI0F25157g Next locus YALI0F25201g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25179g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25179gYALI0F25179g_mRNA-001YALI0F25179g_CDS-001

Nucleotide sequence

 

>YALI0F25179g
ATGCATGGCTGGACTCCCCGGCCAAATTCGTCCAGTACACATCTTTTACACCAGCAACAA
CCAAACACAATGTCCGCTCGACGCTCGAGACGCAATTTTGATGACGACACGGTGGAAGCG
TCCAGTGACAGCGAAGGCAAAAAGCGCAAGTCACGGGCCGCCGACAAAGCAGCAGCCGTA
CCTGAAGAGGATGAGGAGGTCGAGGACTCGGATGGACTGGTGGAGTCCGAGGAGGTTACA
CGGTGCATTTGTGGCCACGAAGAGTTGCATCTGGACCGGGCTGCCAAGGCTCTGGAAATT
GATCAGGGTCTGTTTATCCAGTGTGATTCTTGCTCTGTGTGGCAGCATGGCTACTGTGTG
GGCATGTACCAGGAGTCTGAAGTTCCCGATGTCTATTACTGTGAGAAATGCCGACCCGAC
CTCCATCAGATTTTCCTACGGCCAAGCGGCCAGACGTCCATCTACAACAAGTCTGCCGAC
GACGATGAAGACGAAGAAAACGAGGATGGCAACGATGAAGGCAATGGTAGCCGGGCTTCG
GTCAAAGAAGAAGAGCTCCTCCCGCCAAAGCGTCAGCGCAGCAGCCGAGCGTCTTCTTCG
ACAGCCTCAGACAGCGGCACTGGTGCAACACGCGAGTCTGCCCGCGACCCTCCCCGAAGC
AATGGAGAGGAGCCTGCAGCTGCTAGTGGCCCCAGACAACAGTCCGGGTCCACCCCCGAG
CAGGGAGGAAAGCGAGGTACGGGTAGAAGTCGACGTCCCGATTCTGCTGCTTCTGCCGCT
GGCTCTGCTGATGATGGCTCTGAAGACATCTCTGACGCAACTGGCGAGGCAGGCCGTGAC
TCAACTCGCAGCAGACGCAATTCGAGCTCTCGTCGTGAGATAACCACCTCGTCGCGACGT
CGCAACAGAGACACATATGAGGAGACTCTCAAGCGGGTGCTTCAGGAGAGCGCCCGCGAA
GCAGGCAAGGACAAGGAGGTCAAAGAGGAAACCACAACGAGCAAGAACTCTACGACCAAC
AACAATAACGCCACAGCCAACAACAGCAGCAGTAGCAAAAAGTCATCGCCTGAGACTACT
GGCACTGCTTCTGGAGCAGCAGCTGCAACAAATGGAACAACCAACGGGTCAGCAGCAGCC
TCGGGAACGTCGGAAACGCCGAAGCGGAAACGCGAACAGGAACTCCAGGCAAAGTCGGAT
ATGGACGGCAGCGACTCGATGGACTCGCCTGTGGCCAAGGCCCGGAAAAAGCGCAAGACA
AAGACGTCGGTGGGTGCTGGAGGAGCAGCCAACTCGCCGAAGCCGAAGGAGACACCCGAA
TACAATGACGAGCGGCCATCCAAGCCACGGGTACCTCATTCACGAACTACAATGAGCGAG
ATGCGACGACGGGTAGCTGCGATACTGGAATTTATTGGCCGCACACAGATGGACATGGCC
AGTGACCAGAACAAGATTGGAGATCAGGTGGTGCTTAGCTCCACCTCTGCAGATATGATG
GATGGACTAACTCGCAAGCTGCTTCTGTGGGAACAGGAGTACGGTAGATATGGCGAGCGA
AGGTGATTAACAGAATATACTTAATTTATTGTATCATTATTATTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25179g_CDS-001

Protein length: 522 aa.
Product: Conserved hypothetical protein

>YALI0F25179g_CDS-001 MHGWTPRPNSSSTHLLHQQQPNTMSARRSRRNFDDDTVEASSDSEGKKRKSRAADKAAAV
PEEDEEVEDSDGLVESEEVTRCICGHEELHLDRAAKALEIDQGLFIQCDSCSVWQHGYCV
GMYQESEVPDVYYCEKCRPDLHQIFLRPSGQTSIYNKSADDDEDEENEDGNDEGNGSRAS
VKEEELLPPKRQRSSRASSSTASDSGTGATRESARDPPRSNGEEPAAASGPRQQSGSTPE
QGGKRGTGRSRRPDSAASAAGSADDGSEDISDATGEAGRDSTRSRRNSSSRREITTSSRR
RNRDTYEETLKRVLQESAREAGKDKEVKEETTTSKNSTTNNNNATANNSSSSKKSSPETT
GTASGAAAATNGTTNGSAAASGTSETPKRKREQELQAKSDMDGSDSMDSPVAKARKKRKT
KTSVGAGGAANSPKPKETPEYNDERPSKPRVPHSRTTMSEMRRRVAAILEFIGRTQMDMA
SDQNKIGDQVVLSSTSADMMDGLTRKLLLWEQEYGRYGERR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG