YALI0F25135g - NDH2

Overview

Description uniprot|O74931 Yarrowia lipolytica YALI0F25135g NDH2 Alternative NADH-dehydrogenase precursor
Locus type CDS
Gene name NDH2
Locus tag YALI0F25135g

Location

Species Yarrowia lipolytica Positions 3248518..3250311
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1794 (nuc.)
Previous locus YALI0F25124r Next locus YALI0F25157g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25135g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25135gYALI0F25135g_mRNA-001YALI0F25135g_CDS-001

Nucleotide sequence

 

>YALI0F25135g
ATGCTCCGTCTCCGTCCAGCCGTCCGAGCGGTCTCCGTGGCTCGAAGCGTCGCTCTGACT
CGGTCATTGCACGTCTCCGTCGCCAAGTTCAACAAAATCGAGGGAACCGCCCCCGCAGGT
CTGCCCAAAGAGGTGAAGCAAACCGCTGGCCACCAGGGACACCACCAGGAGATCCCTAAG
CCCGATGAGAACCACCCCCGACGAAAGAAGTTTCACTTCTGGCGATCATTGTGGCGCCTG
ACCTACCTTTCGGCCATTGCTTCTCTGGGATACATTGGCTACCGAATCTACGTCATTCGA
AACCCCTCCGACCAGTTGCCCGCCGACCCCTCCAAGAAGACCCTGGTGGTGCTGGGTTCC
GGCTGGGGCTCCGTCTCCTTCCTCAAGAAGCTCGATACTTCTAACTACAACGTCATTGTC
GTCTCTCCCCGAAACTACTTCCTGTTCACCCCTCTACTGCCCTCTTGTCCCACCGGAACC
ATTGAGCACCGATCCATTATGGAGCCCATCCGAGGCATCATTCGACACAAGCAGGCCGAA
TGCCAGTACCTCGAGGCTGATGCTACCAAGATTGACCACGAGAAGCGAATTGTGACCATC
CGATCCGCCGTCTCTGAGAACTCCAAGGAGGAGGTCATCAAGGAGATCCCCTTCGACTAT
CTTGTTGTCGGTGTTGGCGCCATGTCCTCCACCTTTGGTATCCCCGGTGTCCAGGAGAAC
GCTTGCTTCCTCAAGGAGATCCCCGACGCCCAGCAGATTCGACGAACCCTCATGGATTGC
ATTGAGAAGGCCCAATTCGAGAAGGACCCTGAGGTCCGAAAGCGACTTCTGCACACTGTC
GTTGTTGGAGGTGGCCCTACCGGTGTCGAGTTCGCTGCCGAGCTCCAGGACTTCTTCGAG
GACGATCTCCGAAAGTGGATCCCCGATATCCGAGACGATTTCAAGGTTACTCTTGTCGAG
GCTCTCCCCAACGTTCTGCCCTCTTTCTCCAAGAAGCTCATTGACTACACCGAGAAAACC
TTCTCTGACGAGAAGATCTCCATTCTGACCAAGACCATGGTTAAGTCTGTTGACGAGAAT
GTGATCCGAGCCGAGCAGACCAAGGGTGACGGTACTAAGGAGACCCTTGAGATGCCTTAC
GGAACTCTTGTGTGGGCCACCGGTAACACTGTGCGACCTGTTGTTCGAGAGCTCATGTCC
AAGATCCCTGCTCAGAAGGGCTCCCGACGAGGTCTTCTTGTCAACGAGTACCTTGTTGTT
GAGGGTACCGAGGGCATCTGGGCTCTTGGTGACTGTTCTGCCACCAAGTACGCACCCACT
GCCCAGGTTGCCTCCCAGGAGGGATCCTACCTTGCTAACCTGCTCAACGGCATTGCTAAG
ACCGAGGACCTCAACAACGAGATCACCAACCTCGAGAAGCAGTCGGAGCACACCTTTGAC
GAGCAGGAGCGAAAGAACATCTTTGCTCAACTCGAGTCCAAGTCCCGAAAGCTGCGACGA
TCCAGAGCCATGCTGCCCTTCGAGTACTCTCACCAGGGTTCTCTGGCCTACATTGGTTCC
GACCGAGCCGTTGCCGACCTGTCCTTCAACTTCTGGGGTATCATGAACTGGTCTTCCGGA
GGAACCATGACCTACTACTTCTGGCGATCCGCCTACGTGTCCATGTGCTTCTCCATGCGA
AACAAGATTCTTGTTTGCATTGATTGGATGAAGGTCCGAGTCTTCGGCCGTGATATCTCT
CGAGAATAAGCGCATAAACCTATACAATAAATTTTAGATTGACAGTACAACTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25135g_CDS-001

Protein length: 583 aa.
Product: Alternative NADH-dehydrogenase precursor
Gene: NDH2

>YALI0F25135g_CDS-001 MLRLRPAVRAVSVARSVALTRSLHVSVAKFNKIEGTAPAGLPKEVKQTAGHQGHHQEIPK
PDENHPRRKKFHFWRSLWRLTYLSAIASLGYIGYRIYVIRNPSDQLPADPSKKTLVVLGS
GWGSVSFLKKLDTSNYNVIVVSPRNYFLFTPLLPSCPTGTIEHRSIMEPIRGIIRHKQAE
CQYLEADATKIDHEKRIVTIRSAVSENSKEEVIKEIPFDYLVVGVGAMSSTFGIPGVQEN
ACFLKEIPDAQQIRRTLMDCIEKAQFEKDPEVRKRLLHTVVVGGGPTGVEFAAELQDFFE
DDLRKWIPDIRDDFKVTLVEALPNVLPSFSKKLIDYTEKTFSDEKISILTKTMVKSVDEN
VIRAEQTKGDGTKETLEMPYGTLVWATGNTVRPVVRELMSKIPAQKGSRRGLLVNEYLVV
EGTEGIWALGDCSATKYAPTAQVASQEGSYLANLLNGIAKTEDLNNEITNLEKQSEHTFD
EQERKNIFAQLESKSRKLRRSRAMLPFEYSHQGSLAYIGSDRAVADLSFNFWGIMNWSSG
GTMTYYFWRSAYVSMCFSMRNKILVCIDWMKVRVFGRDISRE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG