YALI0F25113g

Overview

Description weakly similar to uniprot|Q98A31 Rhizobium loti transcriptional regulator
Locus type CDS
Locus tag YALI0F25113g

Location

Species Yarrowia lipolytica Positions 3244178..3244939
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 762 (nuc.)
Previous locus YALI0F25091g Next locus YALI0F25124r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25113g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25113gYALI0F25113g_mRNA-001YALI0F25113g_CDS-001

Nucleotide sequence

 

>YALI0F25113g
ATGTACATTCCTCCCTACTACAACGAGCCCGACCTGGAGGTCCAGCAGAAGCTCATCAAG
GCTGAGGCCCTGGGCACTCTCATCACCCACCTTCAGGACGATACCGCCACTCTACCTCTG
CAGGCTAACTACATCCCCTTCACTCTTGTTACCGGCCCCGAGCATGGCGAATATGGCACC
CTTCGAGCCCACATGCATCGAATCAACCCCCAAGCCAAACAGCTGATCCACGCCTCCAAG
TCCGGAGATCCTGACGCCCTCGTTGCCTTCACCCACACCCAGGCCTACGTGCCTCCCAAG
TATTACGTTGAAACCAAGCCATCTACCGGCGACGTGGTGCCTACATGGAACTTCGCCTCA
GTCCAGTGCTACGGAAAAGTCAAGGTCTTCTACGAGAAAGACGAGACCACCCGAGCTTTC
CTGATGGACCAGCTTAACCAGCTTGTCGATGAGCAGGAAGCGCTAGCCGGATCGAAATGG
AAGGTGTCTGATGCCTCTGATAGCCACCTGGAGAAACTACTTCCCAAGATTATTGGTATC
GAGATCAAAATCACCAAGCAGGAGGGAAAGTTCAAAATGTCCCAGGAAAAGATGGGTTGC
GGAGACAAGGACGGAGTCATTGAAGGCTTTGCAAAGGACGGCAACCAGGAGATGAGCGAT
TGCGTGAAGCACGCTTGTGAACGACGAGCAGAGCGACTCGCTAAGCGATAAACTGACTAT
AGCTACCAATATTATCATATAATAATCCTTTCCGTACAAGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25113g_CDS-001

Protein length: 237 aa.
Product: Conserved hypothetical protein

>YALI0F25113g_CDS-001 MYIPPYYNEPDLEVQQKLIKAEALGTLITHLQDDTATLPLQANYIPFTLVTGPEHGEYGT
LRAHMHRINPQAKQLIHASKSGDPDALVAFTHTQAYVPPKYYVETKPSTGDVVPTWNFAS
VQCYGKVKVFYEKDETTRAFLMDQLNQLVDEQEALAGSKWKVSDASDSHLEKLLPKIIGI
EIKITKQEGKFKMSQEKMGCGDKDGVIEGFAKDGNQEMSDCVKHACERRAERLAKR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG