YALI0F24651g

Overview

Description similar to uniprot|P40086 Saccharomyces cerevisiae YER141W COX15 Cytochrome c oxidase assembly protein
Locus type CDS
Locus tag YALI0F24651g

Location

Species Yarrowia lipolytica Positions 3199365..3200965
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1601 (nuc.)
Previous locus YALI0F24607r Next locus YALI0F24673g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24651g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24651gYALI0F24651g_mRNA-001YALI0F24651g_CDS-001

Nucleotide sequence

 

>YALI0F24651g
ATGCTCCTCGCCCGATCGAGGTTCTACTTCAACGGCAACCTCGCCGTGCTGCAGGCCAAA
ACCACAGCCGCCAAGGTGGCCTCCAAGACCTCGGCTCTGCCTGCCCTCACTCTGGGTCGA
AAGGTCGCTTCTGTGTCTCGTGGAGGCGTTCTCGGCGCTCTAACTCGAGCGTCAGCCCCC
AGACTCGACAAGACCCGTCAATTCTCCACAGTCGCTGCCCTGTACCAGCGATCCAACGTC
CACGTGATTAAGCCTCGAGAATCCGATCCCAATGAGGACCCCAAGGCCTCTCCCAGAAAG
TGGCCTGTCAACTCGTCCAAGTGGGCTGGATACTGGCTCATTGCCTCCGCTGTCTCTGTC
TTTGGTATTGTTGTTCTCGGCGGTCTGACTCGTCTGACTGAGTCTGGTCTGTCCATCACG
GAGTGGAAGCCTGTCACAGGATCCCTGCCTCCCATGAGCGAGGCCGACTGGATCGAGGAG
TTTGACAAATACAAGGACTCCCCCGAGTTCAAGCTGCTCAACTCCAACATCACCCTTTCC
GAGTTCAAGTTCATTTTCTGGATGGAGTGGGCCCATCGTCTGTGGGGTCGATTCATTGGT
CTCACCTTTGTGCTCCCTGCCGTCTACTTTGTTGCCCGAAAGCGAGTCTCTCCCAATATC
GCCGGCCGTCTCGGTGTCATTTCTATCCTGCTTGGTCTCCAGGGAGCCATTGGATGGTGG
ATGGTGAAGTCGGGTCTTGACAACAAGTTCATGGAGACAGATAACTCTCACCCTCGAGTA
TCCCCCTACCGACTGGCCACCCATCTTGGAGCGGCGTTTGTTCTGTACTGGGCCATGCTC
TCCACTGGTGTTCAGGTTCTGCGAGAATCCCGATGGATCGCCAACCCATCTTCTGCAGTT
GCTGACTTCGCCAAACTCAACAATCCTATCCTCAAGCCCTTCAAGCGATACACTACAGTC
TTCTGCGGCCTTGTGTTCCTCACTGCCATGTCCGGAGCCTTTGTTGCGGGTCTCGATGCC
GGAATGATCTACAACACCTTCCCCTTCATGGGAGAGGGAATTGTTCCCCCCAAGACCGAG
CTCATGGACCCTCTGTTCGCCCAAAAAAATGACAAATCTGATCTTTGGTGGAGAAATATC
TTCGAGAACCCCGTGACTGTCCAGTTTGACCACCGAGTGCTCGCCACTACGACATTCTGC
GCGTCCTTTGCTCTGCTGCTGATGTCTAACAGATTCAAGCCCTTCTTGCCCCGAAAGGCT
TTCCTGGCCTGCCACTCCATCATGGGTATCGCTATGGTTCAGGTCACTCTGGGTATTTCC
ACTCTGATATATCTTGTCCCCACTCCTCTGGCTGCCGCTCACCAGGCCGGAGCTCTTGCT
CTGTTGTCTGCGGCAGCCTACCTTGGAGCCCAGCTCAAGCGACCCCGAGTGCCCTTCCAG
AACATTGTTTCTCGATTGCACAATGCCTCTGTCGTTAAGAACGGCTTTGAGGAGGTTGCC
AAGAACCAATACAAGAGAAAGACAACCAAGTTGCCCGGCTCTCTTTAATCCAACTGTACA
TATGTAAATAGACTAACTGCCAACTGGCATTTCTGATGATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24651g_CDS-001

Protein length: 516 aa.
Product: Protein required for the hydroxylation of heme O to form heme A, putative

>YALI0F24651g_CDS-001 MLLARSRFYFNGNLAVLQAKTTAAKVASKTSALPALTLGRKVASVSRGGVLGALTRASAP
RLDKTRQFSTVAALYQRSNVHVIKPRESDPNEDPKASPRKWPVNSSKWAGYWLIASAVSV
FGIVVLGGLTRLTESGLSITEWKPVTGSLPPMSEADWIEEFDKYKDSPEFKLLNSNITLS
EFKFIFWMEWAHRLWGRFIGLTFVLPAVYFVARKRVSPNIAGRLGVISILLGLQGAIGWW
MVKSGLDNKFMETDNSHPRVSPYRLATHLGAAFVLYWAMLSTGVQVLRESRWIANPSSAV
ADFAKLNNPILKPFKRYTTVFCGLVFLTAMSGAFVAGLDAGMIYNTFPFMGEGIVPPKTE
LMDPLFAQKNDKSDLWWRNIFENPVTVQFDHRVLATTTFCASFALLLMSNRFKPFLPRKA
FLACHSIMGIAMVQVTLGISTLIYLVPTPLAAAHQAGALALLSAAAYLGAQLKRPRVPFQ
NIVSRLHNASVVKNGFEEVAKNQYKRKTTKLPGSL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG