YALI0F24189g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F24189g

Location

Species Yarrowia lipolytica Positions 3163350..3164646
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1297 (nuc.)
Previous locus YALI0F24167g Next locus YALI0F24211r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24189g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24189gYALI0F24189g_mRNA-001YALI0F24189g_CDS-001

Nucleotide sequence

 

>YALI0F24189g
ATGTCCATCTCAGCTTCCATCTCGACCGCAACCCCGGCCCAGAGCTCGCCGTACCAACTA
CCTCTGGACGACCACATGCAAGAGTTTGAATGGTTAAGGGTCGTCGAAAGCGTTCTAGCA
GACAGAGAGTACTCGGAGACAGAAATTACACAGAAGGAGCTCGACGAGCTCATCCCGACG
CTCGACAGCCTGGAGATCAGCACCGATGAGGATGACGAAATTTCATTCGGAGACTACATT
CATTTTTCGCCCACAAGAATCGAGCACCCAGAGGGGACACCACGACCACAAACACACTCA
GAAATGCGAAGCAGGACCCCAAGAAGCATACCCAGAACGGAGTGGACTCGCAAACCTGGC
TCCATAACACCCCTTGAAGTCCATTCACCCCTGGAGCTGAAGAGAGACACAAACGGAGGC
ACACCTCGAAGAAATCGACCTACCAAGATCCCAGTGCTCAGTTCGAGGCTCGGGCCTCCC
ATTGTTCCTGTCGGGACAGAACCGACCAAGCCAGGACTCTCTGCCTTCCGGTCCAATCTC
CAATTCAGTCACCTACCAAAGCTCAAGGTGTTCGAGGACGACTCTGAAGAGGATGCAGAA
GCACGAGAAGATGACTCTGGGAAGGACTCATATGGGGACGACAGTTCAGTTCAATTCCTC
TCAGAAATAGTCCACAACGACAGCTCAGTTCAAATCATCGAACCCGTTCAACGGCAACCT
CCGTCAGTGTCTCCTCCGTCAACACCACCTCGTACTCAGTCTTCCCAACTCGGATTCGCG
GCCAATGTCACACAGCCGCTTCGAAGAAGCAGAAGACTTGCGGAGGCCGAGTTGTATAAC
GAGCCACCGTCGCCTGGGCGAATCTGTAGCCCCATAAAGCGCGAAATCAACCTCAAGCCA
TCGCTGAGAGTGTCCGGAAACACGCCATCATCCAGCAAACTAATTTCGTCGCTGCATTCA
GCACTAACGGGTTCGGAACCAATTGGATTTTATAGCGCCAACGATCTACGGGCCCGGCTG
GAGGGGAAGGAAATCAGAGACCGGTTTTTCGACGGTCGCAAACGGCGCACCAGAAGAAAC
CAACGGGGTGTCAAATGGGCTGAGGAGCTCGAGTGGTAATTCAGCAAGACCCTGGGATGT
AATCTGAAACAGCTTATAAAATGCATTGTCATCCATAATGAGAAAAAGAGGTAAAAAATG
AGGGCTGTCCGCAATTTGCCCGAGACCCGCCCGAGAGTGTAAGCTACTGGCACATAGACA
TATCGGATTACTTATTAGCTATAAGACTTGTGTTTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24189g_CDS-001

Protein length: 373 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F24189g_CDS-001 MSISASISTATPAQSSPYQLPLDDHMQEFEWLRVVESVLADREYSETEITQKELDELIPT
LDSLEISTDEDDEISFGDYIHFSPTRIEHPEGTPRPQTHSEMRSRTPRSIPRTEWTRKPG
SITPLEVHSPLELKRDTNGGTPRRNRPTKIPVLSSRLGPPIVPVGTEPTKPGLSAFRSNL
QFSHLPKLKVFEDDSEEDAEAREDDSGKDSYGDDSSVQFLSEIVHNDSSVQIIEPVQRQP
PSVSPPSTPPRTQSSQLGFAANVTQPLRRSRRLAEAELYNEPPSPGRICSPIKREINLKP
SLRVSGNTPSSSKLISSLHSALTGSEPIGFYSANDLRARLEGKEIRDRFFDGRKRRTRRN
QRGVKWAEELEW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG