YALI0F24123g - RPL18

Overview

Description uniprot|Q6C0J5 Yarrowia lipolytica YALI0F24123g RPL18 Ribosomal 60S subunit protein L20
Locus type CDS
Gene name RPL18
Locus tag YALI0F24123g

Location

Species Yarrowia lipolytica Positions 3153399..3154183
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 785 (nuc.)
Previous locus YALI0F24101g Next locus YALI0F24145g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24123g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24123gYALI0F24123g_mRNA-001YALI0F24123g_CDS-001

Nucleotide sequence

 

>YALI0F24123g
AGTGAGTACGGAACGACGACACTGTGAATAATGAGGGTGGAATAATGGAAGCGACATGAC
CAATGTGATTATCGAGACATGGAGGATGTCATTATAATGGGTTGGATAATGTTGTCTCCG
CACGACCAGACAAGGGTATCCTCAATACAATACTAACTCAGTGGGTCGACTCAACGAATA
CCAGGTTATTGGCCGAAAGCTGCCTACCGAGGCTGCTCCCGAGCAGAAGCTCTACCGAAT
GCGAATTTTCGCCCCCAACGAGGTTGTCGCCAAGTCTCGATTCTGGTACTTCCTGACCCA
GCTCAAGAAGGTCAAGAAGTCCACCGGTGAGATTGTTGCCATCAACAAGATCTCCGAGAA
GACCCCCACTAAGGTCAAGAACTTCGGCATCTGGATCCGATACGATTCCCGATCCGGCAC
TCACAACATGTACAAGGAGTACCGAGACGTTTCTCGAACCAACGCCGTTGAGATGCTCTA
CCAGGACATGGCTGCCCGACACCGATCTCGATTCCGATCTATCCACGTCCTCAAGGTCGT
TGAGCTCGAGTCCGAGGAGGACGTCAAGCGACAGTACGTCAAGCAGCTGCTTGCCCCCGA
TCTCAAGTTCCCTCTGCCCCACCGAGTCCAGAAGAGCCGAAACATCTTTGCTTCCAAGCG
ACCTTCTACCTTCTACTAAGCGCATACCACGTAACAAAGGTATAAAGGAAAAAAATGTAT
TATTGCACAAAATTTGGAGACGTTTGTAGAGAATTTATTGGTTATGAGAGAGCGATTGTA
TTCTT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F24123g_CDS-001

Protein length: 173 aa.
Product: Ribosomal 60S subunit protein L20
Gene: RPL18

>YALI0F24123g_CDS-001 MGRLNEYQVIGRKLPTEAAPEQKLYRMRIFAPNEVVAKSRFWYFLTQLKKVKKSTGEIVA
INKISEKTPTKVKNFGIWIRYDSRSGTHNMYKEYRDVSRTNAVEMLYQDMAARHRSRFRS
IHVLKVVELESEEDVKRQYVKQLLAPDLKFPLPHRVQKSRNIFASKRPSTFY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG