YALI0F23683g

Overview

Description weakly similar to uniprot|P38996 Saccharomyces cerevisiae YPL190c NAB3 polyadenylated RNA-binding protein
Locus type CDS
Locus tag YALI0F23683g

Location

Species Yarrowia lipolytica Positions 3108299..3110615
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2317 (nuc.)
Previous locus YALI0F23661g Next locus YALI0F23705g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23683g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23683gYALI0F23683g_mRNA-001YALI0F23683g_CDS-001

Nucleotide sequence

 

>YALI0F23683g
ATGAGCGACTCCGACAGAGGGAACGCAGAGATTGATGTGCCTCAAAACTCGGTCTCTCGC
CCGCCTTCCGGCTCAGGTTCGAGTTCAGGCGTGGATTCGGCCTCGTCTTCGGGAACGTCG
ACGTCCACAGAATCCATAATGAGTGCTGACAGAGCAACGTCATCATCGTCGTCGCTGGAC
GAAGATGATGACCACTACAGCCCCAAGTACGAACCCACCGACTCAAACACAGACAACAAA
GATACCAGCACACACACACACACAAACGGCCACACCAACGGCCACGGAAATGACACAAAC
GTTGACAACCTCGACGACTTGCTACGTGCATGTAGTGGCCAACAACAACACGATAATAAC
ACACAAACTGCTGCTGCAGACTCTCTACAACGCATCCTCCAGCCGCTGTCACATGCCACC
AACAGCACCAACGGCTCGAACGGCACCAACGGCTCGAACGGCTCGAATGGCATCAACGGC
ACCAATGGCGGTTACGACGTGCCGCCCACGGAGCCCGTGTCGGAGGCTGAAATCAAATCG
CCACTCACCCCCGAGGAGGCATCCCAGTTCTCTGAATATCGACGTGTCGAGTCCGAGTAC
ATCACCTCGGGCAACTGGGACAAGTTCCCTGTCGGCTCGCGGATGTTCATCGGCAACCTT
CCCGGCGACCGTATCGACACCATGGAGCTGTTCAAGCTGTTCAATCAATACGGACGGCTG
GCCCAGATCTCTATCAAACGTGCTTACGGCTTTGTGCAATACTTCTGTCCCGAAGACTGC
GAGCGTGCCATGAAGGTCGAGAATGGCCGGTACCTGCGGGGATTTTACCTCAAGCTCGAG
GTGGCCCAACCGCAGTGTAAGAATCGGGAGCGCCGTCGGTCTGTGTCGCCGACTGGCTAC
AAGAACGGTGACCGGTATAGAAGCCGTTCTCCGGCTGGGTCCGATCTTGACCGCAACAGC
GACCGGGGCCGGTCGCGACGACGAGACCTCCTGTCTCGTAAGAAGCCTCACATTATTCCC
GAGGTCCAAATTGTGATGGAATCTCGTGTTGACCGAGATTTCGTCCACCGGGTAGAACGC
CCTCTCAAACAAAACGGCATGTCTGTCAACTACCAGTGGTTGCAGCCACGGACGTCCGTC
AAGGAGTCCCTTCCAGACATTGTCAACCAGCTCATCCGAGAGCGGGTGTTTGGTCTGATC
ATTGTCGAGCGAATCAACCAGCAGGCCAACAAGGTGAACCTCCAGGTATTCCACCCAGCC
CCCGATGGCGGTGTTCGATTCGATGAGTACCAAATGGTCGACATTCCGGTCGCCATTGAG
CTCCTCGGGCGAGTCAAACGTGAGAAAATGGCCAACTTCCAGCCTCACCCTGTGGTTCCT
GCTCACATGAGCTCGCCTCAGCCCATCTCAACCAACGGATACTACGGAATGCCTGCCATC
CCTGGCATTGGTGGTCTTCCCAATCCCGCGAGCATGGCTCTTCCTGGAGTTGGTCCAATG
GGGATGCCCATGGGCATCCCCACTCTGTCCAACGATCAGGTGGCGACTCTCATGGCTCTT
CAGAACCGTCTTGATACCATGAGCCTCCAAAAAGTGGCTCTGGCGCTGCAGCAGCAGGCC
GCCATGCAACACCAGCCCCAGCCCCAGCAGAGCACATTCATGCCGCCGTTCATGTCAAAT
ACAATCCCCAACTTGTTTCCCTCCCCGTCGCCACCTCCTGCTAAGCCTCCTCGACACCAC
AATGGCAACGGTGGCAACAAGAACGGTTTCTCCAAACGCAACCGCAATGATCGAAACAAC
AACAGCAACAATGATCGTAACAACGATCGCGGCCGTTCGGGCCCCCTCCCATATGGCCCT
GTATCCAACCGTCCTCAACCATCAGCCTATGTTGCTCAACACACAAATCGCAAGCCTGTG
TCTGAGCCTCTGTCTGGTCGAGATGAGCCTGCTGCTCCTGTTCCCACTTCTGCCGATCCC
GGCCAGAACGTCAAGAACATTTTGGACCAGCTGGCGAATCTCAAGGGTTGAGCATGACGG
TATTTCCATGTCATCCTTGTTTTGACCCACTTACTTTTGTAGACGCTTCTCTTTGCGAAG
CATCATTCCACACACAGCGTGTGCGCCTTCCGCGCCCCACCCTTCCGCGCCTTACCACTC
CAAGCCTCGCAGTGCTCCTCTCTCCCGTCCGCATTCAAAGCGGCGGTTCCTTGTGATGAT
CGAGTTTTGATTTCAATCCTGCTCATGTGACACAGTCATGATCTCAAAATATTTATTTAT
TTTGCATTATATTCTATTTGTGTGTACACATCATTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23683g_CDS-001

Protein length: 677 aa.
Product: Conserved hypothetical protein

>YALI0F23683g_CDS-001 MSDSDRGNAEIDVPQNSVSRPPSGSGSSSGVDSASSSGTSTSTESIMSADRATSSSSSLD
EDDDHYSPKYEPTDSNTDNKDTSTHTHTNGHTNGHGNDTNVDNLDDLLRACSGQQQHDNN
TQTAAADSLQRILQPLSHATNSTNGSNGTNGSNGSNGINGTNGGYDVPPTEPVSEAEIKS
PLTPEEASQFSEYRRVESEYITSGNWDKFPVGSRMFIGNLPGDRIDTMELFKLFNQYGRL
AQISIKRAYGFVQYFCPEDCERAMKVENGRYLRGFYLKLEVAQPQCKNRERRRSVSPTGY
KNGDRYRSRSPAGSDLDRNSDRGRSRRRDLLSRKKPHIIPEVQIVMESRVDRDFVHRVER
PLKQNGMSVNYQWLQPRTSVKESLPDIVNQLIRERVFGLIIVERINQQANKVNLQVFHPA
PDGGVRFDEYQMVDIPVAIELLGRVKREKMANFQPHPVVPAHMSSPQPISTNGYYGMPAI
PGIGGLPNPASMALPGVGPMGMPMGIPTLSNDQVATLMALQNRLDTMSLQKVALALQQQA
AMQHQPQPQQSTFMPPFMSNTIPNLFPSPSPPPAKPPRHHNGNGGNKNGFSKRNRNDRNN
NSNNDRNNDRGRSGPLPYGPVSNRPQPSAYVAQHTNRKPVSEPLSGRDEPAAPVPTSADP
GQNVKNILDQLANLKG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG