YALI0F23133g

Overview

Description weakly similar to uniprot|W9Y4Y7 Capronia epimyces hypothetical protein A1O3_04543
Locus type CDS
Locus tag YALI0F23133g

Location

Species Yarrowia lipolytica Positions 3035712..3037683
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1972 (nuc.)
Previous locus YALI0F23111g Next locus YALI0F23155r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23133g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23133gYALI0F23133g_mRNA-001YALI0F23133g_CDS-001

Nucleotide sequence

 

>YALI0F23133g
ATGCAACAGCCGCCAGCAAACTCGGCTCTAGCTCTCAAGATCCGTAATGCGACGTCTGCA
GACGATTATATGGCCTTGGGATTGTCGTCGTGGCAGTCCACAATGTCCAAGTACTCGATC
GCAGACGTGGTCATCATTGAGCAGCAGCTTCGAAGCAAAAAGGATCGCCGAAATGAGGAA
TTGAGATGTCTGATAAACACCACGTACCGTGATTTATTGGGTACTACAGACGACATTCAA
TCTCTGAGCGAAAAAATGACCAAACAACACACACTTTTGAGTAATCTGAGCCATGGAGAT
ATCAAACAGGAACTGGCTGTATGTGACAAAAGTCTAGAAAGATGGGTAAAGGAGACGAAA
GCAAACGAGGCTCAACTGGACAAATCTGCCATCGAGTCGATTCTGCGAAAATTGCTTTTC
TTCGCAGACTCCAGAATTGAACAATCCAACCTGCTCATGGCAAGACTGTTCTATCTCCAC
TCGCTGGACGGCTCAAACAAACCACGTGACTTTCTCAAGTCCAAGTACCGCAAGCTACTT
ATAAACTGTCTCAGTGGAGAAATCTCGCCTAGTGATCTTCTCTCCTATTGCATTTTTTTC
TCTGTGTCTGTGGAGGACGCGTTTGAAGATCTTTTGAAGCTCCGATTCGAAGGACTTGAA
CAGAAGAGCTTAACCAAAGCTCTCACCAGTATTTCATACACACTCAAGTTTGCCTCCAAG
TACCTGGCGTCTGCTTCCTTGAAGTCTTCTATTCTATATCAGCTGGAATCTGCCCAATTT
TCCAGTGAAGGCACACTATGTGAGACCCTCAAGACAGAGCTACGCAAACAGAACATTGCT
CTGTTGCTTAACTGGGACACCTTACCGAGACAAGTTGCTGAGGCAGCGTCTATTCCTTCT
CGAAGCAAGTATTCCCGTGATGACAAGTTTCCTAAACGCATCATTGATCTTCTGCAGGAG
TATTGCCGTGACCAGATGGGACCTGTTTTGGATCGTGCATCTACCGATTCCATCAAGTCT
CGTGATACGCTGGAGGGTTTGATTGACCTTCTAAGGGACGTATTTGGGCTCTTCCGAAAG
TCTCGAGATCTGCGGAATGCTGATTTCGGCTCCGTTTTTAACATCGACAAGTTTTTGCAA
GCATGGAAGACCAAATTTCATGAACTGATCAAGGCAAACCTCGGAGAGGTTGACTTTGGG
CTTTTCAAGAACAAGATAAAGGACAAGGTGTCTCTGGAGGCTATCATTTCGTTTGATTCG
CCGCTTGTGAACGCTCTTACTCTTGTGGGAGCAGGCAAGTCGTCCAAGATCGATGTTATG
GGCATTCTCGACACTCGGAACAAGGTCACCGGATCATCTGCATTCACTATTGTGTCTCAG
TATGAACAGGTGTTGCAGAACGTGGCCAAGATCCGAGCTGTCCTCGGCAGTCTAAAGGAG
GTGTTTGTAAAGGTCAAGGGATCACTGGATGATGACGATGAAGGTGATGATGAGGATGAT
GAGTGGACCTCGAAGCATGTGGCTCTTCTGGAGAAGGAGTATACCACCAGTGAGGAGTTC
ATCACAACCTGTCTGGCTGGGTTGCATTCCAAGATTCTGACTGAGCTGGAGAAGTGTTCT
CACAAGACCATTGATGAGTGCAAATTTGTGCTCCAAATCGCGTTGTCTATGCATGAAGCC
GGCACCTTTGACAAAATCATTGGGGACATGTATTCTGAACTTGCTGAACTTATTGGGACA
GAATTTGTGAGCGAGATGGGCGAGAACACCTCAAACACACAGTTGGTTCTGTTCCAGTCG
CGAGAGAAGCTAACAAGAGTCTTCTCTGGCCCTTCTTCGCTATTCACTGTGTGCCCTAGG
TTCGAGTCGGTATTTATGCCCAAGTACTCTGCCAAAGTCGACGTCCAGCCTGAAGAGAAG
ACACAGAGCGACTTACTTTTTGCTTAGATTATAGAATGACTGATCGCACTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23133g_CDS-001

Protein length: 649 aa.
Product: Conserved hypothetical protein

>YALI0F23133g_CDS-001 MQQPPANSALALKIRNATSADDYMALGLSSWQSTMSKYSIADVVIIEQQLRSKKDRRNEE
LRCLINTTYRDLLGTTDDIQSLSEKMTKQHTLLSNLSHGDIKQELAVCDKSLERWVKETK
ANEAQLDKSAIESILRKLLFFADSRIEQSNLLMARLFYLHSLDGSNKPRDFLKSKYRKLL
INCLSGEISPSDLLSYCIFFSVSVEDAFEDLLKLRFEGLEQKSLTKALTSISYTLKFASK
YLASASLKSSILYQLESAQFSSEGTLCETLKTELRKQNIALLLNWDTLPRQVAEAASIPS
RSKYSRDDKFPKRIIDLLQEYCRDQMGPVLDRASTDSIKSRDTLEGLIDLLRDVFGLFRK
SRDLRNADFGSVFNIDKFLQAWKTKFHELIKANLGEVDFGLFKNKIKDKVSLEAIISFDS
PLVNALTLVGAGKSSKIDVMGILDTRNKVTGSSAFTIVSQYEQVLQNVAKIRAVLGSLKE
VFVKVKGSLDDDDEGDDEDDEWTSKHVALLEKEYTTSEEFITTCLAGLHSKILTELEKCS
HKTIDECKFVLQIALSMHEAGTFDKIIGDMYSELAELIGTEFVSEMGENTSNTQLVLFQS
REKLTRVFSGPSSLFTVCPRFESVFMPKYSAKVDVQPEEKTQSDLLFA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG