YALI0F22957g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F22957g

Location

Species Yarrowia lipolytica Positions 3012906..3014853
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1948 (nuc.)
Previous locus YALI0F22935g Next locus YALI0F22979r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F22957g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F22957gYALI0F22957g_mRNA-001YALI0F22957g_CDS-001

Nucleotide sequence

 

>YALI0F22957g
ATGTCCGAGTACCGACGCCAGGCGCACTCGAAATACAAAATGCCCGGGGGTCTGCTGCCT
CCGGTGAACCTCGGCGAGGGTTCTGGGCCTACGCACGCCAATTCGGGCTTGCGCACAGAC
TCCAAAATGGCTTCATTTGTTGCAGTGCCTGACCGAAAGGCCACCTCCTCGCCCTTCAGA
CACTCGGGGCAGTTCAGCAACTCATTCACCTCGCTTGCTAGCCTCAAAGATCTTAGCGAC
CGAGATCTCCCGGTCAAAGCCAGCCCTCGCAACAATAATAGCCATGGCACCAACAACAGT
AACAACAGTAACAACAGTAGCAGCAACAACAGCGCCAAGGATGTGTCTATCCCCACGACA
CCCAGATCCAGCTCTCCCGCTACAGCCGCTCTGTCACCAGTAGACGAAATGAACAGTCCC
AAGAGCCCTACCGAAGCGGCATATTCGTCCGGTCAAACGCCGCCTTATTTGAGAAACATG
ACCATGAAACGACGGAACAACAGCAAGTCGGCCACACCGCCTCCTTCGACTCCTGGACTG
CTTGGACGAGCAGGAGACAATGGCAAAAAGAGCAAGGACGAGATTCAGGCATCCCCACGG
TTTCTGGATGTCAACAATAGTCAGTGGAGAGAAGCCGCCACAAGCCACAACTCCACAGCT
AACCTGGGACCCAACTCGAATTCCAACTCCACAACTGGAATGCCTCCCCGATCAGCCTCG
TCATGGATGATGAGCAACACCCCCATTGCACCCATAGCACTCATGGGCCACGCTGGTTTG
AGAAACGGACAAGGTGGAAACAAGGGAGGCCGCGCATTCGATCTAGGAGACGTCCTGTCT
AGAGACGACGACTCGGATAGTAGCAGCAGTCGCAGTGTTAGTCGAAGCCGCAGCGTCAGC
CATGATCCTGACGAACGAAGTGGTCGTGCTAGCTCGCCTTCATGCATGGATGATTGGGAC
GGTGATAACAGGCTTAACATGCTCATGGCTATCACTGGTGACATTCCTCAGACACCCATG
AGTGCTGGAGGAGGTTTCTCAGACGACTTTACTAATGATTCACCTGGAAGCCCTCCAATG
AGTGCTGGCGGCGCTGGCTGGATGGGCCACCAAGGAGAAGATGTGGACGCCCTGGGCATC
CTGGAAAAACTGGATCCTGCCCCTACGTTGGTTGACTACACTGCTCTAATCGATGATTAT
GGTGATCTAGGGTCTCAGGACGTGCGAAAGCAAAAAATCAAGGAGTTCAAACGCAAACTC
CAGGAACGCGCTCAGCAAGATAGCGAGCCAGTTGCAAAGTCTATCTCTGTGGTGGACGCC
ACTCAGCATATGAAATCCAACCTCATCAGTAACGTCGGTGCTCAGATCGGATCTGTTGAA
ACTCGACTTTCTAAGAAGCTGGAACTCTTTCAAGCCAATCTCGAGGCCCTCATTGATCTC
AAGGCTCGAGCCAAAGAAACAGTGTTAGCATTCAAGAAGGAGACGCTTACATCTTATGAG
ACGTTCAACTCACAACTGGACCATATTCGTGCCATCCAGGAGTCGTCTGAAGCCATCGAA
CTGCTAGAAGAGCGAATTGGAAATTGTAGAGCTAAAGTGACGGAGTACAAGGAACGTCTC
AAGACGGTAAACCAGTGGATTGATGAACAGGAACGGTTTGATCGACTCTGGTCTCGACGT
AAGCGAGCCGCCTTCAAGATTACTGTGTCTGTGCTTGTTGTGATCCTGCTCATCTCCTCA
CTGGTTCTCTTTGTTGCTACATTGAGAGGAGGTTTCGGTAAGAGTCTGAAGCTTGGATTC
AAAAAGGCGAAAGGAAGCACTGTGACACTTTCCAAACAGAGTCAGTTTGATGATGTTTTG
CAGTGCCTTGGTGACTTTGACCATTGTCGTTTCAAGAATGACATGAAGGAATTGTAGGCA
TATAGATTTATTTATTCATTTACTTAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F22957g_CDS-001

Protein length: 639 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F22957g_CDS-001 MSEYRRQAHSKYKMPGGLLPPVNLGEGSGPTHANSGLRTDSKMASFVAVPDRKATSSPFR
HSGQFSNSFTSLASLKDLSDRDLPVKASPRNNNSHGTNNSNNSNNSSSNNSAKDVSIPTT
PRSSSPATAALSPVDEMNSPKSPTEAAYSSGQTPPYLRNMTMKRRNNSKSATPPPSTPGL
LGRAGDNGKKSKDEIQASPRFLDVNNSQWREAATSHNSTANLGPNSNSNSTTGMPPRSAS
SWMMSNTPIAPIALMGHAGLRNGQGGNKGGRAFDLGDVLSRDDDSDSSSSRSVSRSRSVS
HDPDERSGRASSPSCMDDWDGDNRLNMLMAITGDIPQTPMSAGGGFSDDFTNDSPGSPPM
SAGGAGWMGHQGEDVDALGILEKLDPAPTLVDYTALIDDYGDLGSQDVRKQKIKEFKRKL
QERAQQDSEPVAKSISVVDATQHMKSNLISNVGAQIGSVETRLSKKLELFQANLEALIDL
KARAKETVLAFKKETLTSYETFNSQLDHIRAIQESSEAIELLEERIGNCRAKVTEYKERL
KTVNQWIDEQERFDRLWSRRKRAAFKITVSVLVVILLISSLVLFVATLRGGFGKSLKLGF
KKAKGSTVTLSKQSQFDDVLQCLGDFDHCRFKNDMKEL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG