YALI0F22341g

Overview

Description similar to uniprot|P25451 Saccharomyces cerevisiae YER094c PUP3 20S proteasome subunit (beta3)
Locus type CDS
Locus tag YALI0F22341g

Location

Species Yarrowia lipolytica Positions 2961688..2962572
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 885 (nuc.)
Previous locus YALI0F22319g Next locus YALI0F22363g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F22341g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F22341gYALI0F22341g_mRNA-001YALI0F22341g_CDS-001

Nucleotide sequence

 

>YALI0F22341g
ATGTCCAATCCTCAAGAAATTAATGGTGAGTACAATGCGAGACGGGAGTGATCACGTGAG
ACGACACCCACTTTCCTACACACGATTCAGCAACCCCGATTCAACCCACGATTCAGCTTA
CAACATCATCTGGCATCAACCACATCTGATTCTAACACAGGCGGCTCTTGTGTCGCAATG
GTCGGAAAAGACTGCGTCGCCATCGCATGCGATCTCCGAATGGGCTCCCAGGGTCTCGGA
GTGTCCAATGACTTCGAGAAGGTCTTTAACTACGGCGACAACGTCTACCTTGGCCTGACT
GGTCTTGCCACCGACGTGCAGACCCTTCATGAGGTCTTTCGAGAGAAAACCAACCTGTAC
AAAATGGCTGAGGAGCGACAAATCGAGCCCGAAACATTCGCCAACCTCGTGAGTTCCACA
CTCTACGAGAAGCGATTCGGCCCCTACTTTGTTGGCCCCATCGTGGCCGGCATCAACTCC
AAAACTGAGAAGCCATTCATCTGTGGATTCGACCTCATTGGATGCATTGACTTTGCCAAG
GACTTCATTGTGTCAGGAACTGCCTCGGACATGCTCTACGGTATGTGCGAATCTCTGTGG
CAACCGGATCTGGAGCCGGAAGACCTGTTCAACACGTGTTCTCAGGCCCTCATGTGTGCC
ATGGACCGAGATCCTCTGGGAGGATGGGGAGCTATTGTTTGGATTATTACAAAGGACAAG
GTGGTGAAGAAGTTGTTGAAGACTCGGCAGGATTAAGCATCATGAGCAAGCGAGTCATGT
TGGGCTAATTGTGGCATGGGTCTGTGAAAGCCGGTGCAACAAAGTGCGGCCTTACGCTCT
TCAGCACCAGCATGTAATGATTATTTAATAGAATTTTTCTCTCTA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F22341g_CDS-001

Protein length: 207 aa.
Product: Beta 3 subunit of the 20S proteasome, putative

>YALI0F22341g_CDS-001 MSNPQEINGGSCVAMVGKDCVAIACDLRMGSQGLGVSNDFEKVFNYGDNVYLGLTGLATD
VQTLHEVFREKTNLYKMAEERQIEPETFANLVSSTLYEKRFGPYFVGPIVAGINSKTEKP
FICGFDLIGCIDFAKDFIVSGTASDMLYGMCESLWQPDLEPEDLFNTCSQALMCAMDRDP
LGGWGAIVWIITKDKVVKKLLKTRQD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG