YALI0F21263g

Overview

Description similar to uniprot|F4RUG4 Melampsora larici- populina hypothetical protein MELLADRAFT_49323
Locus type CDS
Locus tag YALI0F21263g

Location

Species Yarrowia lipolytica Positions 2817208..2818641
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1434 (nuc.)
Previous locus YALI0F21241g Next locus YALI0F21285g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F21263g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F21263gYALI0F21263g_mRNA-001YALI0F21263g_CDS-001

Nucleotide sequence

 

>YALI0F21263g
ATGGAATCGGTTCCGGCAAGTATCGAGACATACAAGACGCTTAAGCCGTCCAAAACGCTC
CGGTACCACCATAACGACCCCATCACATCGCTCGATTTCGATGACACTGGAGCCTACGCC
GTCACAGCTGGAACAGATGAATCCATTCAGCTGTATTCGGCTCACAAGGGCACTCACCAG
CGATCCAGCTACTCGAAGAAGTATGGCGCGCATTTGGCCCGGTTCACACACAACAGCATG
AGCATCGTCTACGCTTCCACCAAGGAAGATGACACAATTCGATATCTGTCGTTGCACGAC
AATTCGTACATCCGGTACTTTAGAGGCCACAAGGACAAGGTGCACGCGCTCAACGTGTCT
CCTATCAGTGATGTGTTGCTTTCGGCATCAATGGATCACACTGTGCGGCTATGGGATCTC
CGGTCGCCCCATTGTCAGGGAGTTTTGAACCTGGTGAGCCCGAATCTGATTGCATTTGAT
CCCCGAGGTCTGTGTTTTGGCGTGGCCAACACATCGGCCCAGGACCTGTCTTTGTACTCT
GTTTCTGCATGGGGATCCGACCCCTTCGCCACGTTTGCTCTTCCTGCTCCCCCTGGAGAC
GGATGGGCCTCTGTAGAGTTCTCCAACGACGGAAAGTATATTCTCTTGGCGACTTACGGA
GAGCAGCACCACGTCATTGATGCTTTCACGGGTAATCTTACGCACAAGCTCGTTGGCCAC
CACCCCTTAAGACGCGATCAGGACAACATGCGGGGCGGCTCCACTCACACTGCATTCTCT
GTGGACGGCCGCACAGTGTTTGGCTGCTCGCGAGACGGCAAGATTATTGTCTGGGACTTG
CAGGACCGAGTCGACGAGCGAGGACGACTGTACCCTTCCAAGGCTCTCAACTGCGCACCC
AACGCAGCCTCCCCTCAGATTCTTGGTGTCAATCCAGCCTCCATGCAACTGGCCACAGCA
GATAAAGAGCTTACTTTCTGGCTGCCGGAAAAAGACGTGGCCGAGCCTCCAAAGGAGGCA
TAGATGTGGTAAAACCTCCAGTCTGCCACAGCTGTGCACCTCGGTTATTATGAAACATGA
CTCTAGTGTGCTTGCGTACATATTTTCACGGGGGTGGACCGAAAAGGTTCTCACACGACA
GTATGATTAGTGGTCTCGACGCACGCACCATGGGGGTATCCCAGGTTCCATGCACGTGGG
GAAAGCCTGCGTCAGAGTATCCTGTGCTCTCACTGAACCAGTACCAGTATTGTACAATGA
CTTGACTTTACAACGCACGTTGTTGTGTTGCTGTTGCTCGAGTGTTCCTGGCAGCTTGAG
CTTGCGGACCTGCAAATGATCAAATTATCGGACCATGATGAGATCCAACTTCCTGGCGCT
TTCCCACATAATATCTAACTGAATAATATATAATGAAACACACAACTGTGGCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F21263g_CDS-001

Protein length: 341 aa.
Product: Conserved hypothetical protein

>YALI0F21263g_CDS-001 MESVPASIETYKTLKPSKTLRYHHNDPITSLDFDDTGAYAVTAGTDESIQLYSAHKGTHQ
RSSYSKKYGAHLARFTHNSMSIVYASTKEDDTIRYLSLHDNSYIRYFRGHKDKVHALNVS
PISDVLLSASMDHTVRLWDLRSPHCQGVLNLVSPNLIAFDPRGLCFGVANTSAQDLSLYS
VSAWGSDPFATFALPAPPGDGWASVEFSNDGKYILLATYGEQHHVIDAFTGNLTHKLVGH
HPLRRDQDNMRGGSTHTAFSVDGRTVFGCSRDGKIIVWDLQDRVDERGRLYPSKALNCAP
NAASPQILGVNPASMQLATADKELTFWLPEKDVAEPPKEA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG