YALI0F20284g

Overview

Description similar to uniprot|O94372 Schizosaccharomyces pombe SPBC1604.06c Uncharacterized protein
Locus type CDS
Locus tag YALI0F20284g

Location

Species Yarrowia lipolytica Positions 2700117..2701809
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1693 (nuc.)
Previous locus YALI0F20262g Next locus YALI0F20306g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20284g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20284gYALI0F20284g_mRNA-001YALI0F20284g_CDS-001

Nucleotide sequence

 

>YALI0F20284g
ATGTCCAAACGAGGAGCTGCCGAAGTGACAAAGAAGGTCAAGAAGGCCAAGTCGGCCGTG
CATATGTCTCCCGAGGAAATTTCCAGTCTCGGGACCGAAATCACAACGTCCACCACCAAT
TACAACAAGTTGTCAGAGCTCATGTCTCTGTTGAAGTCTACCGACGAAGACGTCCACACA
GCTGCTCTCAACAGTCTATACAATGTTTTCCGACACATGGCCAAGGAGGATTTGCTGTTG
AACCCGGATCACGTACTGGAACCCAAGACGAAGGACCAGAAGACCAAGGTTCCTGATCTG
AACAAGAAGACCGTGGCCGAGTGGATCTCTCCTAAGTACGAGACTTACAAGAAGCACGTT
CTGAAGATGCTTAACACCTCCAAGTCCGCCAACAGCCGTCTGATGGCTCTTGAGATTCTA
ATGCGACTAATCAAGATAGAGAACAAGTGCTGGAGTGCCGATGGAGTGTCTTGGTTCCCC
ACTAGACTGCTTGGAGAGATTGTGTGGGCCATTGCCACATGTTCTGTCGACGTGAATCTC
AGTACACTGTCCCACTTTGTATCTGAGTACCTGGACAAGTACGACGATATTCGATTTCAT
GTCTACAACGAGTCTGGTAAGCTGTTCAGACAGACCAACATTCCCGATTCCGTGGACCAG
AAGAAGCTGTCGATTCGAATCCAGGAACTCTTTCTGCACGCCGATGCTGCTGCCTTCCCC
AAATCCAATGCAGAGATCACCTCATTCTGGACCAAGAAGCCCACTTCCAAGAAGGACGCC
ATTTTGCATCATGACACACAGACTCTGGCCTTCCAGACCGGATGGCTTCGAATCCTGGGT
CTCCCCCAGACCAACGATCAATACAAGACTGTCCTGACAGTCATGCATCAAAAGATAATC
CCCTTCCTGAACCAACCTCACACCACCATGGATTTTCTTACCCAATCGTACAACATGGGA
GGTGGAGTTGCTCTGCTGGCTCTTAACGGTCTTTTCTCGCTCATGCAGAAGCAGAACCTG
GAATACCCCGACTTCTACTCCAAGTTGTACGCTCTGCTGGACGAGCAGGTTCTCTATGCA
TCTTACCGATCGCGGTTCTTCCGACTGCTCGACATTTTCCTGAGTTCCTCGCATTTGGCC
AGTGCCATTGTCGCCTCTTTTATCAAGAGATGCTCTCGACTTGCCCTCACAGCTCCTCCT
GCTGCCGTAGTGACTCTCTACCCTTTTGTCTACAACCAGCTCAAGCGACACCCTGCATGC
ATGACTCTGCTCCAGAGACACGTTGAAGGAGAGTACGAGGACCCATTTGATCCCGAAGAG
ACCGATCCTCTCAAGACCAACGCGTTGGAGTCGTCTTTGTGGGAGCTGGAGACTGTCCAG
TCTCATTACCACCCCAATATCTCCAAGCTGGCCAAGATCATCTCCGAGCCTTTCCGAAAG
CCCCAGTACAACATGGAGGACTTCCTGGACCACTCCTACGAGTCGCTAATTGACCAGGAG
ATGGGCAAGAACATCCGAAACGTCCCTGCTGTGGAATTCGACAAATTCAAGGTCTTTGGA
GATGGACAGTACATGGAGGGATGGTCTTTTTAATGCAAGCATAAGAGGCTCTGAGAGCAA
AGCTCGAGGAAGTGATCAAGCATGTAGATAACTTAGGGAACAGAAAAAAGACGCTCAAAC
GATTAGACTCATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20284g_CDS-001

Protein length: 531 aa.
Product: Conserved hypothetical protein

>YALI0F20284g_CDS-001 MSKRGAAEVTKKVKKAKSAVHMSPEEISSLGTEITTSTTNYNKLSELMSLLKSTDEDVHT
AALNSLYNVFRHMAKEDLLLNPDHVLEPKTKDQKTKVPDLNKKTVAEWISPKYETYKKHV
LKMLNTSKSANSRLMALEILMRLIKIENKCWSADGVSWFPTRLLGEIVWAIATCSVDVNL
STLSHFVSEYLDKYDDIRFHVYNESGKLFRQTNIPDSVDQKKLSIRIQELFLHADAAAFP
KSNAEITSFWTKKPTSKKDAILHHDTQTLAFQTGWLRILGLPQTNDQYKTVLTVMHQKII
PFLNQPHTTMDFLTQSYNMGGGVALLALNGLFSLMQKQNLEYPDFYSKLYALLDEQVLYA
SYRSRFFRLLDIFLSSSHLASAIVASFIKRCSRLALTAPPAAVVTLYPFVYNQLKRHPAC
MTLLQRHVEGEYEDPFDPEETDPLKTNALESSLWELETVQSHYHPNISKLAKIISEPFRK
PQYNMEDFLDHSYESLIDQEMGKNIRNVPAVEFDKFKVFGDGQYMEGWSF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG