YALI0F20218g

Overview

Description similar to uniprot|P07806 Saccharomyces cerevisiae YGR094w VAS1 valyl-tRNA synthetase
Locus type CDS
Locus tag YALI0F20218g

Location

Species Yarrowia lipolytica Positions 2693415..2696606
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3192 (nuc.)
Previous locus YALI0F20207r Next locus YALI0F20240g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20218g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20218gYALI0F20218g_mRNA-001YALI0F20218g_CDS-001

Nucleotide sequence

 

>YALI0F20218g
ATGAGTGAATCCGCACAGCCCCCCGCTGCCGCTCCTGCTGCAGGAGAGGCCAAGCCCAAG
ACCCCCAAGCAGCTGGAAAACGAGAGAAAGAAGGCCGAGAAGCTGGCCAAGTTCAACGCC
AAACAGGCTGCTAAGAAGGACGCTCCCAAGAAGGAGGCTGCCCCTAAGAAGGCAAAGAAG
GAGGTTGAGCCTGTTCCCGAGTTTGTCGACAAGACTGTCAAGGGCGAGAAGAAGATTCTT
GTGTCTCTGGATGATCCTGCTCTCAAGTCTTACAACCCTGCCACAATCGAATCTTCGTGG
TACGAGTGGTGGGAGAAGCAGGGATACTTTGAGCCTGAGCTCAAGGCCGACGGATCTCCC
AAGGACAAGGGTCTCTACGTCATCCCCATTCCTCCTCCTAACGTCACTGGAGCTCTCCAT
ATTGGACATGGTCTCACCGTTGCCCTTCAGGATGGTCTGATTCGATTCCACCGAATGAAG
GGAAAGACTGTTCTTTACGTCCCCGGTTTCGACCACGCCGGTATCTCGACTCAGTCTGTT
GTTGAGAAGATGCTGTGGGCCAAGGAAAAGAAGACGCGACACGATCTGGGCCGAGAAAAG
TTCACCGATCTGGTCTGGGAGTGGAAGGAGGACTACCACGTTCGAATTAAGAACCAGTTG
AAGAAGCTCGGTGCTTCGTACGACTGGTCTCGAGAAGCCTTCACTCTGGACCAGCCCCGA
ACCAAGGCTGTCAACGAGGCCTTCTGCCGACTGCACGAAGAGGGCGTCATCTACCGAGCC
TCCCGTCTCGTCAACTGGTGTGTTGCCCTTAACACTACCCTGTCTAACCTAGAGGTTGAG
AACAAGGAGATTGATGGCTTCACTAAGATGAACGTTCCCGGCTACGACGAGCCCGTTGAG
TTTGGTGTCCTCACCCACTTCTCCTACAAGGTCACTGGCTCCGACGAGAAATTGACCGTT
GCCACCACTCGAGTCGAGACCATGTTTGGAGACACTGGTATTGCTGTTCACCCCGACGAT
AAGCGATACGCTCATCTCCACGGCAAGACTGTTGACCACCCCTTCCTGGACCGAACCATT
CCCATTGTCACTGATGCCGAGGCTGTCGACATGGAGTTTGGAACCGGAGCCGTCAAGATC
ACTCCTGCCCATGACCCCAACGATTACCTGACCGGTAAGCGACAGAACCTCGAGTTTGTC
AACATCCTTAATGACAACGGTACTCTCAATGAGGCCTGTGGCGATTTTGCCGGTCTCAAG
CGATTCGATGCCCGAAAGAAGGTCATTGAGAAGCTCAAGGAGGTTGGTCTGTTTGAGAAC
CAGACCGCCAACCCCATGTCGGTTCCCACCTGTGCCAAATCTGGAGACGTCATTGAGCCT
CTCCTCAAGCCCCAGTGGTGGGTCCGAAACAAGGAGCAGGCTGATGTTGCCATGGAGGCT
GTTCGAGATGGCCGAATCACCATCACCCCTAAGACCTCCGAGTCCGAGTACTTCCAGTGG
CTCGGCAACATCCAGGACTGGTGTATCTCTCGACAGCTGTGGTGGGGTCACCGAGCTCCC
GTCTACTTTGTCAACCTCGAGTCTGAGGCCGATCAGGACAAGGAGGACGGCAAGTGGTGG
ATTGCTGGCCGAACCGAGGACGAGGCCCGAGAAAAGGCCGCTGCCAAGTTCGGAACTGAC
AAGTTTACCCTCGAGCAGGACGAGGATGTTCTCGATACGTGGTTCTCCTCCGGTCTGTGG
CCCTTCTCTCTGCTCGGATGGCCCGACAAGACCAAGGACATGGAGACGTTCTACCCCATG
ACCATGCTGGAGACTGGCTGGGATATTCTCTTCTTCTGGGTCGCCCGAATGATCATGCTG
GGTATCAAGCTCACTGGCGACATCCCCTTCCGAGAGGTGTTCACCCACTCTCTGGTTCGA
GACGCCCAGGGCCGAAAGATGTCCAAGTCTCTCGGTAACGTCATTGACCCTCTGGACGTC
ATTTCAGGTATCCCTCTCAAGGACCTGCATGCCAAGCTGCACCAGGGTAACCTGGACCCC
CGAGAGGTCAAGAAGGCCGAGGACGGACAGACCATGTCTTTCCCCAACGGTATCCCTGAA
TGCGGTACCGACGCCATGCGATTCGCCCTTTGTGCCTACACCACCGGAGGTCGAGACATC
AACCTTGATATTAACCGAGTCGAGGGCTACCGAAAATTCTGCAACAAGATGTACAACGCC
ACCAAGTTTGCTCTCATGCGTCTTGGCGACGACTACGTCCCTCCTGCTAGCGACGCTCCC
GGCAAGGACCTCTCTCTCGTCGAGAAGTGGATTCTGCACAAGTACACCCATGCTGCCAAG
ACTGCTGATGAGGCTCTGCAGCACAACAACTTCATGGACTCCACCACCGCCGTCTACAAC
TTCTGGCTCTACGAACTGTGTGACGTTTACATTGAGAACTCCAAGTTCTTGATTCTCAGC
GGTACACCCGAACAGCAAAAGTCCGCTCGAGACACTCTCTACACTTGTCTGGAGGGTGCC
ATCAAGATGATGCATCCCTTCATGCCCTACCTCACCGAGGAGTTGTGGCAGCGACTCCCC
CGACGAGTCGGCGACAAGACTGAGACCATCATGCGAGCCTCCTACCCCGAGTTCAACCCT
GCCTTTGATAACGCCGAGGCCGAGAAGGGCTACGATCTGGTTCTGGATATTGTCAAGGCC
GCTCGATCTCTGCTGGCCCAGTACGGCATTCTCAAGGACTCCCAGATCATTGTCCAGGGC
TCCGACGCCGTGTCCAAGACCGTTGGTGAGCAGACCGAGTCGATTCTGTCGCTGGTCAAG
GCCGCCAACAAGGTGCAGTCCATTTCTTCTTCCGACTCTGCACCTGACGGATGTGTTGTT
TCTGTCGTCAGCCCTGAGTGCTCTGTCTACATCCTTGTCAAGGGTCTCGTTGACCTCGAC
GCCGAGATCAAGAAGGCCCACACCAAGATCGAGAAGTGCGAGAAGTCCAAGGCTTCGCTC
GAGAAGCAGATGGCCGTTAAGGACTACGAGACCAAGGTGCGAGCCGACGTCCAGGAGTCT
AACACCAAGCGATTTGAGGCTCTGACCGCCGAGATCGAGGGTCTCAACTCCATGGTTGAG
GACTTCAAGAAGCTTTCTGCTTAGGTGGATCTTGTAAATCTCTACTGAATGAATAATGTG
TATTGTATTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20218g_CDS-001

Protein length: 1048 aa.
Product: Mitochondrial and cytoplasmic valyl-tRNA synthetase, putative

>YALI0F20218g_CDS-001 MSESAQPPAAAPAAGEAKPKTPKQLENERKKAEKLAKFNAKQAAKKDAPKKEAAPKKAKK
EVEPVPEFVDKTVKGEKKILVSLDDPALKSYNPATIESSWYEWWEKQGYFEPELKADGSP
KDKGLYVIPIPPPNVTGALHIGHGLTVALQDGLIRFHRMKGKTVLYVPGFDHAGISTQSV
VEKMLWAKEKKTRHDLGREKFTDLVWEWKEDYHVRIKNQLKKLGASYDWSREAFTLDQPR
TKAVNEAFCRLHEEGVIYRASRLVNWCVALNTTLSNLEVENKEIDGFTKMNVPGYDEPVE
FGVLTHFSYKVTGSDEKLTVATTRVETMFGDTGIAVHPDDKRYAHLHGKTVDHPFLDRTI
PIVTDAEAVDMEFGTGAVKITPAHDPNDYLTGKRQNLEFVNILNDNGTLNEACGDFAGLK
RFDARKKVIEKLKEVGLFENQTANPMSVPTCAKSGDVIEPLLKPQWWVRNKEQADVAMEA
VRDGRITITPKTSESEYFQWLGNIQDWCISRQLWWGHRAPVYFVNLESEADQDKEDGKWW
IAGRTEDEAREKAAAKFGTDKFTLEQDEDVLDTWFSSGLWPFSLLGWPDKTKDMETFYPM
TMLETGWDILFFWVARMIMLGIKLTGDIPFREVFTHSLVRDAQGRKMSKSLGNVIDPLDV
ISGIPLKDLHAKLHQGNLDPREVKKAEDGQTMSFPNGIPECGTDAMRFALCAYTTGGRDI
NLDINRVEGYRKFCNKMYNATKFALMRLGDDYVPPASDAPGKDLSLVEKWILHKYTHAAK
TADEALQHNNFMDSTTAVYNFWLYELCDVYIENSKFLILSGTPEQQKSARDTLYTCLEGA
IKMMHPFMPYLTEELWQRLPRRVGDKTETIMRASYPEFNPAFDNAEAEKGYDLVLDIVKA
ARSLLAQYGILKDSQIIVQGSDAVSKTVGEQTESILSLVKAANKVQSISSSDSAPDGCVV
SVVSPECSVYILVKGLVDLDAEIKKAHTKIEKCEKSKASLEKQMAVKDYETKVRADVQES
NTKRFEALTAEIEGLNSMVEDFKKLSA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG