YALI0F20174g

Overview

Description similar to uniprot|Q9Y8G1 Emericella nidulans Multidrug resistance protein MDR (ABC-transporter)
Locus type CDS
Locus tag YALI0F20174g

Location

Species Yarrowia lipolytica Positions 2686313..2690339
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 4027 (nuc.)
Previous locus YALI0F20152g Next locus YALI0F20196g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20174g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20174gYALI0F20174g_mRNA-001YALI0F20174g_CDS-001

Nucleotide sequence

 

>YALI0F20174g
ATGACATGGTCAAGAGAGGAGCCTGCCCATACTCCACAACCTACTCAATCGCGCCGATAC
ACACCCACTTACGGTCCTGCAAAAGATGACTATCGAGGTGATAGCGGAGGCAACAGACAC
AGTGGTCATGGTGGAAACAGGAGGATTGAGATACCCATCACAACAATTATTCAACGCCCT
TTTGAGCACTACCGTTCCCACAATAAGTCTCCTATAGAGTTTTCCACCAGTCCTTCTGGG
CCGTCAGACAGCGATGAGGATTTCGGAGACTTGACTGAGGCAGAGATTGAAGTTCTACGA
CGTCAAATCTCGACGGATAAAGTCAAGGTAAACTTTCTTACACTGTTCAGGTACGCTACC
AAACTTGATATCTTCATTCTGTTCATTGGAATGGTCACAGCTGCCGCAGCTGGTGTTTGC
ATGCCTCTCTTCACTGTCATTTTCGGTCAGATGACCAATGAGTTCTTAGCTTTCATTGTG
CTTGGTTCATCAGCTGACCGTTTCCAGCATCAGATTAACCATTATGCTCTGTATTTTGTC
TACATTGCTGTGGCTACGTTTTGCTTAACGTCAATCAAGACATACATTACTGTCGAAAGA
GGAGAACGGTTGAGTGCTCGAATCCGAGAGAATTATTTGAAGGCTATCATGAGACAGAAC
ATTGGCTACTTCGACAAACTGGGAGCTGGAGAGGTGACCAACAGAATCACCACTGATACA
AATCTGATTCAGGAAGGCATTTCCGAGAAATTGGGACTTATTGTGTCGGCTGTTTCCTCG
TTCATTACCTCACTGGTGATAGGATTCATCAAATCGGCTCGACTCACTGGAATTATGATC
TCCACTGTTGTCGCTCTTGTCCTGGCCATGGGAATCTGCTCCACTTTCCTTGTTAGATAC
GTTAGATGGGCAATTGAAGACGACAGCGAGTGTTCGTCTATTGCGGAGGAGTGTTTTGCA
TCAATTACCAACATTGTGGCATTTGGAATGCAGGTGAAGATGGACAAGCGGTACGAGAAG
CCTCTCAACTCGAGTCTGAAGAATTACCTGCTTAAGGCACGAGTTCTTGGAGCCATGGTA
GGCATCCTTTGGTGCATCACTTATTGCATGTATGCCCTTGCACTCTGGGAGGGTTCTCGG
CTTGTCAACAAGGGTGAGACCAGCATCGGTCATGTCATCACTGTTCTTATGGCTCTCATG
ATTGGTGCTTTTCAGTTAGGAGGAGTCGCTCCCAATATGGAATCTCTTGGATCTGCAGTC
GGGGCGGGTAAGAAGATCTTTGAGACCATTGATCGAGTTCCAGATATCGATTCTCTCAGT
GGAGGAGAAACTCTCTCAAATCTTCGAGGCGCTATCTCGTTTAAGAATGTCCATTTCCGG
TACCCTTCTCGCCCTACGGTTCCTATTTTGCGAGAGTTCAACCTCGATATTCCCTCCGGA
GCTACCGTTGCATTGGTTGGAGCTTCTGGATCAGGTAAGTCAACCATCGTTGCATTATTG
GAGCGCTTCTACCAGCCTCTAGGAGGCTCCATCACAGTTGATGGTGTGAGCATTCTGTCT
CTTGATGTAAAGTGGCTTCGTCAACAAATGAGTCTTGTTTCTCAGGAGCCGACTCTGTTC
AATTGCACTATCTTTGAAAACATTTCTCACGGTTTGATTGGAACCGAGTATGAGAATGCA
GAGAGATCTGTTAAGATGAAACTTGTTGAAGACGCATGTGAGCAGGCCAACTGTTCAGAG
TTCATCAAAACTCTTACTGACGGTCTTGACACACAGGTTGGTGAGAAGGGGTATCTCTTA
TCGGGTGGACAAAAACAGCGAGTAGCTATTGCCCGAGCCATCATTTCTAACCCTCCTATT
CTACTGCTTGATGAAGCTACGTCAGCTCTAGATACTCGCAGTGAGAAGCTGGTTCAGCAG
GCTCTGGACAAAGCTGCCAAAAACCGAACCACTATTGTCATTGCACACCGTCTGAGTACA
ATCAAGAATGCCGACAAGATTGTGGTCATGTCCAAGGGTGAGATTCTTGAACAGGGCTCT
CATGACGAGTTGATTGCTGCAAGAGGAACTTACTATGGATTGGTTGGAGCTCAGAGAATC
GAAGACGGAGGTCCAGAAACCGCATCGACCACAGAAAAGGGCTACTACTGGGAAAGCGGT
TCTGGATCCGATTTTGACGTTGGTAGTAATGTGTCTGTCGAAAAGACGACTCCTCTCAAC
ACCTGGGGAATGATCAAGCTTCTAGCTCGTTTCAACCGAAATGAGCGACTTCCTCTTTTG
CTTGGATCGGGATTCGCAGTCATCTGTGGAGCCGGATACCCTTCTCTTGCTCTTCTCTAT
GGATCTGTGATGCAAGCATTTATGGTCGACCCTTTGGCTTACAAACATATGCTCCACGAG
ATTGACAAGTTCTCTGGTTTCTTCTTCATGGTGGGAATGGTCCAGCTGGGATCCTACTTC
ATGCAGGTTTACTATCTGGGTGTGGCCTCAGAGACTCTAGTGAGGAACCTCAAGCGAACC
ATCTTCTCACATCTTCTTAACCAGGACCTGCGCTTCTTTGACACCACCACCACCGGCAAG
TTGACTTCTTCCCTGTCTAAAGATACACAAAATGTTCAGGGACTAGGAGGAGCTACCTTT
GGACAGATTCTGTCGTCTATTGTCACTGTTATAATCTCAGTGATTCTCTCCTGTTGCTAC
ACCTGGAAGCTTGGACTTGTCTGTTCCGCCTGTATTCCTCTCATTCTATCCTCTGGCTTC
TTCCGGTTCTACATTCTGACCCAGCTCAACCAGCGAGGACGAAAGGTGTACGAATCTTCG
GCGGGATACGCCTGTGAAGCAACAAACAATATCCAGACGGTGATGGCGTTGACTCGAGAA
GACGATGTTCTCAATTTTTACTCTTCCAAGGTCAACAATGTGGTGTATCACTCTGCCAAG
AGTAACGCCATCAGTAGCATGTTGTTTGGTGCTTCGCAGACTCTCATCATTCTTATCAAT
GCCCTTGGATTCTGGTATGGCTCAACATTGATTCGAAAACGGGAAATTGACATCAACCAG
TTCTTTGTTGCCTTTGTCACTGTTGTCTTTGGTGTCCAATCAGCTGGATCCATCTTCTCC
TTCACTCCTGATATGGGTAAGGCCAAGGTAGCTACTCAAAGCATTCATGAAATTCTCAAG
GTGAAACCTGAGATTGGGGGAGACAAGGAGTCAGGTCTTTCTCTTGATCCTGAAAAGGTT
GTGGGCAATATTTCATTCGACAATGTGAGATTCAGATACCCTGAACGACCTAAAATTCCT
GTTCTTCAGGGTCTGAGCCTGTCCATCCCTGCTGGCTCATATGTCGCTCTTGTTGGCTCT
TCTGGCTGTGGCAAGTCAACTACTATTTCGCTGATTGAACGGTTTTACGATGTGCTTCAA
GGAAGTATCACTATCGATGGCATTGATATTCGAGATCTCAATCTTGGATCGTATCGGTCT
CTCATCTCTCTGGTGCAGCAGGAGCCTATTCTGTTCAGTGGAACTATCCGAGAGAACATC
TTGCTGGGTGCTGAAGGAGATGTCGACGATGCTACCTTGCATTCTGCAGCTATCCAGGCC
AACATCCACAACTTTGTCATGTCCTTGCCCGATGGATACGATACCTTCTGCGGAAACAAG
GGCACGTTGCTTTCGGGAGGACAGAAGCAGCGAGTGGCCATTGCACGGGCTCTGATACGA
GACCCCAAGATTCTGTTACTGGATGAAGCCACTTCTGCCCTGGACTCTGAATCTGAAAAG
GTTGTTCAACAGGCTTTGGACACTGCAGCTCAAGGAAGAACCACCATCGCGGTGGCTCAC
AGACTATCCACAATTCAAAATGCTGATTCTATTTATGTCCTTGAAGATGGAAAAGTCTTG
GAGCAAGGTACTCATTCTCACTTGATGGCGAAGAAGGGACGATACTACGAGCTGGTCAAG
TTGCAAGCTTTGGAGGGCTGACGTGGATGAACGATTACATAAAACACTAATGGACATCAT
ACAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20174g_CDS-001

Protein length: 1327 aa.
Product: Multidrug resistance protein MDR (ABC- transporter), putative

>YALI0F20174g_CDS-001 MTWSREEPAHTPQPTQSRRYTPTYGPAKDDYRGDSGGNRHSGHGGNRRIEIPITTIIQRP
FEHYRSHNKSPIEFSTSPSGPSDSDEDFGDLTEAEIEVLRRQISTDKVKVNFLTLFRYAT
KLDIFILFIGMVTAAAAGVCMPLFTVIFGQMTNEFLAFIVLGSSADRFQHQINHYALYFV
YIAVATFCLTSIKTYITVERGERLSARIRENYLKAIMRQNIGYFDKLGAGEVTNRITTDT
NLIQEGISEKLGLIVSAVSSFITSLVIGFIKSARLTGIMISTVVALVLAMGICSTFLVRY
VRWAIEDDSECSSIAEECFASITNIVAFGMQVKMDKRYEKPLNSSLKNYLLKARVLGAMV
GILWCITYCMYALALWEGSRLVNKGETSIGHVITVLMALMIGAFQLGGVAPNMESLGSAV
GAGKKIFETIDRVPDIDSLSGGETLSNLRGAISFKNVHFRYPSRPTVPILREFNLDIPSG
ATVALVGASGSGKSTIVALLERFYQPLGGSITVDGVSILSLDVKWLRQQMSLVSQEPTLF
NCTIFENISHGLIGTEYENAERSVKMKLVEDACEQANCSEFIKTLTDGLDTQVGEKGYLL
SGGQKQRVAIARAIISNPPILLLDEATSALDTRSEKLVQQALDKAAKNRTTIVIAHRLST
IKNADKIVVMSKGEILEQGSHDELIAARGTYYGLVGAQRIEDGGPETASTTEKGYYWESG
SGSDFDVGSNVSVEKTTPLNTWGMIKLLARFNRNERLPLLLGSGFAVICGAGYPSLALLY
GSVMQAFMVDPLAYKHMLHEIDKFSGFFFMVGMVQLGSYFMQVYYLGVASETLVRNLKRT
IFSHLLNQDLRFFDTTTTGKLTSSLSKDTQNVQGLGGATFGQILSSIVTVIISVILSCCY
TWKLGLVCSACIPLILSSGFFRFYILTQLNQRGRKVYESSAGYACEATNNIQTVMALTRE
DDVLNFYSSKVNNVVYHSAKSNAISSMLFGASQTLIILINALGFWYGSTLIRKREIDINQ
FFVAFVTVVFGVQSAGSIFSFTPDMGKAKVATQSIHEILKVKPEIGGDKESGLSLDPEKV
VGNISFDNVRFRYPERPKIPVLQGLSLSIPAGSYVALVGSSGCGKSTTISLIERFYDVLQ
GSITIDGIDIRDLNLGSYRSLISLVQQEPILFSGTIRENILLGAEGDVDDATLHSAAIQA
NIHNFVMSLPDGYDTFCGNKGTLLSGGQKQRVAIARALIRDPKILLLDEATSALDSESEK
VVQQALDTAAQGRTTIAVAHRLSTIQNADSIYVLEDGKVLEQGTHSHLMAKKGRYYELVK
LQALEG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG